Hordeum vulgare subsp. vulgare (domesticated barley): 123404795
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Entry
123404795 CDS
T11213
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123404795
Membrane trafficking [BR:
hvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
123404795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
123404795
NCBI-ProteinID:
XP_044954673
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All DBs
Position
6H:complement(8500469..8508667)
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AA seq
1490 aa
AA seq
DB search
MADDLTDADFFDRLVGDDAPAPEPGPAVRGSPEAEGLARGVSGLGLGEPGPSAAGQVAAP
RAVAPEGGSPGQGRGAAALHTAVKQVQWAAFGADDGGLDPFGDLAAAAGQEEDPFPGTAS
AGQTPGSSAVGGAVDHAFFGGTQGQGLDLAAETARDQGFAGVGSDQSAATQLGGAGAAVD
PADPRYLESMYPGWKYDEATQQWYQLDAAQAAGKEHQQFGASYLHNSAQAGLETIAEESA
AAAAAGIASGWGQGAASEYPANMLFYAEYPGWYFDTDKQEWQSLEAYQQAAAQASAASAA
AQVGTANHGLVAPSGGVNYSVNQAEVPAVSNQVAQHNYGQQSQWQPDAFANSIQPESAAN
ILAGSFYGSDQHAHAESTSSSPNRQVPFNTDETSTSHYGNLQNDYSTIGNQQAGYKGFEP
STVYQTSQNALQSSTGNQGSYKAFEPTAARHIGENKGSTPSTGFSAGYKGFTPSTVHQAG
YKGSGTSTGHHTKAFEPSSGHQAGYMGSQPSTGQHAGYMGSQPSTDHQSSYMGFGTSTDQ
GYGDANGFVNTQGFVPTGSMYNSQKQAHANTQAHLSNSYLGTENSMNFSQQQFSGTNASH
MQFGYSPHGEVSSAGRPPHALVAFGFGGKLIVMKGTSSMATNFNSGNQGSSTGTVSVLNL
SEVVADKVDASRITDGSALSYFHVLCRQPVPGPLVGGSAASKDVNKWLDEMITWYESSTS
EHPRGDPRKLLISLLKILCQHYGKLRAPFGSDPSQEDTDGPEMAVTKLFSSCKRSSNHMG
DFGSNFGFMQNIPSESQMQSVAQEVQALLVSGRRKEALLHAQEGQLWGPAVILALQLGDN
FYVDTVKKMAQCHFISGSPLRTLCLLIAGQPADVFNVENNSNINYDTLGASQQPMQTNPN
GMLDDWEENLAIITANRTKGDDLVITHLGDCLWKEKNEVAAAHSCYLVAELNIDPYSESA
RLCLIGADHLKSPRTFASPEAIQRTEVYEYTKVLGNSQYILLPFQPYKLIYAYMLAEVGR
LADSLRYCQASMKVLKASGRAPELEAWKQLFSSLEDRIRTHQQGGYGTNLAPAKLVGKLF
TSLDKSISRMMGTPSATLPPVPQGSVGDKEIYSAPAAAKFVNSQSVMTMSSLTASPSVHS
ITEMAENSGGAGRKIAHNRSVSEPDFGKPQKQGSRSDNTQSSASGSRFGWIGSTLQKTMG
FVSKSRQAKLGQQNKFYYDEKLKRWVEEGAEIPAEEPPLAPPPTKSSSYQNGMPDYNLNG
PASGMHIPNGVAEQRSPKHSDHGLGMPPIPPSQNQFSARGRMGVRSRYVDTFNKAGATGA
AQSYNRPAAPSVTPPTGARFFVPTAAAVAAEQMPSQSAETRGETFPRDERSSSPPAETSF
SSPPPAAQFSTGMSSTIQRYPSMDNIATPNQAPWMSPGSNSSSFASRSRAASWSGTYSDQ
FSSTAGARSPDGPIVPSPQMPGRPPSHSRSNSNSSVQFTGLTEDLHEVEL
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacctcaccgacgccgacttcttcgacaggctcgtgggcgacgacgcccct
gcgcccgagccgggtcccgccgtccggggctctccggaggcggaggggctggcccggggc
gtctccggcctcggcctcggcgagcccgggccgtcggcggcggggcaggtcgcggcgccg
cgcgctgtggctccggagggcgggtcgccggggcaggggaggggcgccgccgccctccac
accgcggtgaagcaggtgcagtgggccgccttcggggccgacgacggggggctcgacccg
ttcggggatctggcggcggccgccggccaggaggaggacccgttccccggcaccgcctcc
gcgggccaaacccccgggagctccgctgtcggtggggccgtggatcacgccttcttcggc
gggacccagggccagggcctggacctggccgccgagacggccagggatcagggctttgcc
ggggtgggctcggaccagagcgcggccacgcagctcggcggtgccggcgctgccgtcgac
cccgcggatcccaggtacctggagagcatgtaccccgggtggaagtacgacgaggccacg
cagcagtggtaccagctcgacgctgcccaggcggccggcaaggagcaccagcagtttggt
gcttcctacctgcacaactcggcgcaggccgggctggagaccatcgcggaggagagcgcc
gccgccgccgccgcgggtattgcatccggctggggacagggggccgcttcggagtacccg
gccaacatgctcttctacgccgagtacccagggtggtactttgacaccgacaagcaggag
tggcaatcgctcgaggcgtaccagcaggccgccgcgcaggccagcgcagctagtgctgct
gctcaggttggaactgcaaaccatggtcttgttgcgccttctggtggggtaaactacagt
gtcaaccaagccgaggttcctgccgtcagcaatcaggtcgcccaacataactacggccag
cagagccagtggcagccggatgcatttgctaacagcattcaacctgaaagtgcagcgaat
atcttggcaggtagtttctatggttccgatcagcacgcacacgccgaatccaccagctcc
tccccaaatcgtcaggttccctttaacacagatgaaacttccacaagtcattatggcaac
cttcagaatgactacagcacgattggtaaccaacaagccggttacaaggggttcgaacct
tccacggtttaccagaccagtcaaaatgcgctccagtcgtccacgggtaaccagggcagt
tacaaggcatttgaacccaccgctgctcgccacattggtgagaacaagggttctacgcct
tctactggtttcagtgctggttacaagggattcactccttccacggtccaccaggctggt
tacaaggggtctggtacttctacgggccaccatacgaaggcatttgagccttcctcaggt
caccaggctggctacatgggatcccaaccttctactggtcaacatgctggttacatggga
tcccaaccttctacagatcaccagtctagttacatgggatttggaacttctacagatcag
ggttatggtgatgccaatggttttgtcaatacacaaggctttgttccaacggggagtatg
tacaacagccagaaacaagctcatgcaaacacccaagcacacttgtctaacagctatctc
ggtactgagaactccatgaacttctctcagcaacaatttagtggtacaaatgcttcacac
atgcaatttggttactctccgcatggagaggtgtcatcggctggacgcccacctcatgct
ctggttgctttcgggtttggaggaaagcttatagttatgaaagggacaagctcaatggcc
acaaactttaacagtggaaatcaggggagttctactggaacagtgtcagttcttaattta
tcagaggttgttgcggataaagttgatgcttcaaggatcactgatggcagtgcacttagt
tacttccatgtcctatgccgtcaacctgttcctggtcctcttgttggtggaagtgctgca
tcaaaggatgtaaacaaatggctcgatgagatgattacatggtatgaatcttccaccagt
gaacacccgagaggtgatcctcgcaagttgcttatttcgttgctgaagatactatgtcag
cactatgggaaactacgagcaccttttgggtctgatccatcacaagaggatacagacggt
ccagagatggcagtaaccaagctcttttcatcttgcaagagaagtagcaatcatatggga
gattttgggtcgaattttggtttcatgcaaaatatcccctctgaaagtcagatgcagtct
gttgcgcaagaggtacaagctcttctagtatctggcagaagaaaagaggctcttctgcat
gctcaggaaggtcaactgtgggggcctgcagtcatactcgctttacaacttggcgataac
ttctacgtggataccgtgaagaaaatggctcagtgccacttcatttctgggtcacctttg
cgaacattgtgccttctcattgctggtcaacctgcagatgtttttaatgtagagaacaac
agcaacatcaactatgatacactaggtgcatcccaacaacctatgcagactaatcctaat
ggtatgttggatgactgggaagagaatttggctattataactgcaaacaggacaaaaggt
gatgacctagttattacccatcttggagattgcctttggaaagagaaaaatgaggttgca
gctgctcattcatgctacttagtcgctgaactaaacattgacccatactctgaaagtgct
cggttatgtctcattggtgcagaccatttgaaatctcctcgaacatttgccagccctgaa
gccattcagaggacagaggtttatgaatatacaaaggtgcttggtaattctcagtatatc
ctactacccttccagccatacaagctaatatatgcatacatgcttgcggaagtgggaagg
ctcgctgattccttgaggtactgccaagcttctatgaaggtgctgaaagcttccggccgt
gcaccagaattggaagcatggaaacaattattttcctccctggaggacaggatacgcact
caccagcagggtgggtatggaacgaatttggcccctgcgaaactagttgggaagctattt
acctcgcttgataaatctatatcccgcatgatgggcacaccatccgcaacacttccacca
gtgccacagggctctgttggtgataaggaaatctattcagcacctgcagctgcaaaattt
gtaaatagccaatcagtaatgacgatgtcatcgttaactgcatccccttcagtgcattct
attactgaaatggcagagaatagtggtggcgctggcaggaagattgcacacaacagaagt
gtttccgaaccagacttcggcaaaccacaaaaacagggttcgcgatcggataatacacag
agcagtgcatcgggttcaagatttggttggattggctccacgctgcagaagacaatggga
tttgtttcaaaatcccgccaggcaaaattagggcaacagaacaagttttactacgatgaa
aagctgaagcgatgggtagaggaaggtgctgagattcctgctgaggagcctcctctcgcg
ccacctccaacaaaatcctcctcataccagaatggaatgccggactataacttaaatggc
cctgctagtggaatgcatattcctaatggagtggcagaacaaagatctccaaaacattca
gatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcgtgga
cgaatgggtgtccggtccagatatgtggacacattcaataaggctggtgcaactggagca
gcccagtcttataatagaccggctgctccatctgtgacaccacctactggtgccaggttc
tttgttcccacagcagctgctgtcgctgcagagcagatgcctagccaatcagcggagaca
cgtggcgaaaccttccctcgggatgagcgttcatcctcacccccagcagaaacatcattt
tcatcacccccgccagcagcacaattttcgacaggaatgtcatctaccattcagcggtat
ccgagcatggacaacattgctaccccgaaccaggcaccctggatgtccccgggaagtaac
agcagctcattcgcatcaagatcacgggcagcatcatggagtggaacatactctgaccaa
ttcagttccacggcgggggctaggtcacctgacggaccgattgtgccctcgccacaaatg
cctggcagacccccctcgcacagtcgttccaacagcaactcgtccgtccagtttaccggt
ttaacggaggatcttcacgaggttgagctctga
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