Hordeum vulgare subsp. vulgare (domesticated barley): 123404943
Help
Entry
123404943 CDS
T11213
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
123404943
Enzymes [BR:
hvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
123404943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
123404943
NCBI-ProteinID:
XP_044954780
LinkDB
All DBs
Position
6H:20092654..20101776
Genome browser
AA seq
722 aa
AA seq
DB search
MSTWAVMAFLLPVIAAALQLQPVARAAALGSLGAGVKLHQDQHQVVVDNGMVQVAVSKPQ
GQIVGIRYVDESNLLYFNNNEISGGYWDVVWNFSGSDYPRGMNDMYISSVPHCQLDGTEL
RVVSASEEQVELSFMSTYDPSRLNSVPLNVDKRLVMLRGGSGFYCYAIFEHAGDWPAIDV
SEARLVFKLDPTTFNYMAVSDGIQRYMPGPADRDAPRAVPLAYKEAVLLVNPSEPQFAGE
VDDKYQYSMDNKDNRVHGWIAGAGGGGGGGDRVPVGFWVVTPSNEFKSGGPLKRELTSHT
GPTSLTMFMGTHYIGNDMMAKIEAGEHWKKVMGPVFIYLNSNPQHGPLWEDAKAQAEVEA
SKWPYSFPESPDFHKAGERGFVTGRLLVRDRYTGAGVDVPARLACVGLAAPGQPGSWATE
SKGYQFWTRASATDGTFAIGNVRAGEYNLYAWVPGVLGDYMRTAPVTVVPGDAVALGDLV
FEPLRSGPTLWEIGVPDRSAAEFFIPEPNPRYLSKLFVARDRYRQYGLWERYSELYPAGD
PVFTVGVSNHSKDWFFAHVTRKTGNGENAPTTRRIRFNLPRVAAGGTYTLRIALAAAHMS
KLKVQVNGATAQGSTGGVLVTPVFGDDNAIARHGEHGRWWSFEFPIDGRLLVQGENTISI
TQARALSVFVGVMYDYIRLEGPSGWDYSGVTNSAGLGKILPPGPQNRWLLVLPTLVYFLL
SK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtgggcggtcatggcgttcctgctccctgtcattgcggcggcgttgcagctg
cagcccgtggcccgcgcggcggcgctagggtccctcggcgctggcgttaagctgcaccaa
gatcaacaccaggtggtggtagacaacggcatggtgcaggtggcggtgtccaaaccgcag
ggccagatcgtcggcatccgctatgtcgacgagagtaacctcctctacttcaacaacaac
gagatatcaggcgggtattgggatgtagtatggaacttttcaggatcggattatccgagg
ggcatgaacgacatgtacatatcctcagttcctcactgccagttggacggtacagagttg
agggtggtgtctgcgagcgaggagcaagtggagctctccttcatgagcacctacgatcca
tcacgcctcaacagcgtcccgctcaacgtcgacaagaggctggtgatgctgagaggcggc
tccgggttctactgctacgccatcttcgagcacgccggcgactggccagccatcgacgtc
tcggaggcccggctcgtcttcaagctcgaccccacgacgttcaactacatggcggtctcg
gacggcatccagaggtacatgccggggccggccgaccgggacgcgccccgtgccgtgccg
ctggcgtacaaggaggccgtgctgctcgtgaacccgtcggagccgcagttcgcgggggag
gtcgatgacaagtaccagtactccatggacaacaaggacaaccgtgtccacggctggatc
gccggcgccggtggtggtggcggcggcggcgatcgggtgcccgtggggttctgggtggtc
acccctagcaacgagttcaagagcggcggccccctcaagcgcgagctcacctcccacacc
ggtcccacctcgttgactatgttcatggggactcattacatcgggaacgacatgatggcg
aagatcgaggccggcgagcactggaagaaggtcatggggccggtgttcatctacctcaac
tccaacccacagcacggaccgttgtgggaggacgccaaggcacaggcagaggtggaggcg
agcaaatggccgtacagcttcccggagtcgccggacttccacaaggcaggcgagaggggc
ttcgtcaccggcaggttgctggtcagagacaggtacacgggtgccggtgtggacgtgccc
gcccggctggcctgcgtcggcctcgccgctccgggtcagcccggctcatgggcgacggag
agcaagggctaccagttctggacgagggcgtcggcgaccgacggcacgttcgccattggc
aacgtccgggcaggggagtacaacctctacgcctgggtcccgggggtcctcggcgactac
atgcgcacggctccggtgacggtggtgcccggcgacgccgttgccctcggggacctcgtg
ttcgaaccactgcgatcggggccgacgctgtgggagatcggcgtgccggaccggagcgcc
gccgagttcttcatccctgaacccaaccccaggtacctcagcaagctgtttgtcgccagg
gacaggtacaggcagtacgggctgtgggagcgctactcggagctgtaccccgccggcgac
cccgtcttcaccgtcggcgtgagcaaccactccaaggactggttcttcgcgcatgtcaca
aggaagacgggcaacggcgagaacgcaccgacgacgcggcggatccggttcaacctgcct
cgcgtcgccgccggcggcacctacacgctgcgcatcgccctcgcggcggcgcatatgtcc
aagctgaaggtgcaggtgaacggggcgacggcgcaggggtcgactggaggagtgttggtg
acgcccgtgttcggcgacgacaacgcgatcgcgcggcacggcgagcacggcaggtggtgg
agcttcgagttcccgatcgacgggcgcctgctcgtgcaaggggagaacacaatcagcatc
acgcaggcgagggcgctcagcgtgttcgtgggagtcatgtacgattacatccggctagaa
gggccctctggttgggattattctggcgtgacaaatagtgctggtctaggcaaaatattg
cctcctggcccgcaaaatcgttggcttctcgtgctgccaacgttggtatacttcctgtta
agcaagtga
DBGET
integrated database retrieval system
