Hordeum vulgare subsp. vulgare (domesticated barley): 123405484
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Entry
123405484 CDS
T11213
Name
(RefSeq) polygalacturonase ADPG1-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00040
Pentose and glucuronate interconversions
hvg01100
Metabolic pathways
Module
hvg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123405484
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
123405484
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
123405484
NCBI-ProteinID:
XP_044955089
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Position
6H:352163873..352165620
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AA seq
262 aa
AA seq
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MVRFGIIGILCTAILLLAGLAWRGVVVAAAGGVDGVFNVEDYGALGDGTTDGTKAFVDAW
AAACGATGLSATLLVPTAKSFLVGLTRFTGPCAFTRITARSSVMGTITTPPASAWSEKKN
HWLMFYLVDGLTVTGNSTGLLDGTGQTWWVDKCKAFHDCVIKAPTALVVMNCTDVELSQF
SSKDSPQIHIGLSMSGKVNVTQLTITALENSPNTDNVHVDRSEDVHITGLTIGTGDDCIS
IGPGSLFVTVDGIVCGPGHGVR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggtttggtatcatcggcatcctctgcacggccatcctgctcctcgccggcctc
gcgtggcgtggtgtggtcgtcgccgccgccggtggggtggacggcgtgttcaacgtcgag
gactacggtgctctaggcgacgggaccacagacggcaccaaagcgtttgtggatgcatgg
gcggcggcgtgcggcgccactggcttgtcggcgacgttgctcgttccgacggcgaagtca
ttcctcgtcggcctcaccaggttcactggtccatgcgccttcaccagaatcaccgcgcgc
tcctccgtcatgggcacgattacgacgccgccggcgagcgcatggagcgaaaagaagaac
cattggctgatgttctacctggtcgacgggctcacagttaccggcaacagcaccggcttg
ttggacggcacaggccagacgtggtgggtcgataaatgcaaagcctttcatgattgtgtg
attaaggcaccgacggccttggtggtcatgaactgcaccgacgtggagctgagccaattc
agcagcaaggacagcccgcagattcacatcggactcagcatgagcggcaaggtcaacgtg
acgcagctcaccatcaccgcgctggagaacagccccaacaccgacaacgtccacgtcgac
cggagcgaagacgtccacatcaccggtttgaccatcggcacgggcgacgactgcatctcc
atcggccccgggagcctcttcgtcaccgtcgacggaatcgtctgcggccccggccatggt
gtaaggtaa
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