Hordeum vulgare subsp. vulgare (domesticated barley): 123405913
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Entry
123405913 CDS
T11213
Name
(RefSeq) uncharacterized protein LOC123405913
KO
K19022
AP-5 complex subunit beta-1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123405913
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
123405913
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
DUF6197
Motif
Other DBs
NCBI-GeneID:
123405913
NCBI-ProteinID:
XP_044955362
UniProt:
A0A8I6Y9D4
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Position
6H:559474767..559478539
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AA seq
1102 aa
AA seq
DB search
MEPRPSPQQPPPTLTAQEWEHLLDDFAAPPPRRDRWLHLPLLDLALSSLPRRDLPSHLKP
LLLAFVDDHLLPPPDPARQLPLLLASLLAFPADHPLRDHLVATVASAFASALSAPLSDPE
GEAPPLAGLVGALLAAANRPNHATDRAARALACDALRALDDALPGLLADVLGHAYALASA
ERSPAAQSYILLLASAARGAVRLGRLGSGSSILAVSGPPVPFSVPAHLLSPLPSPPAPVP
PSEQNVREIRKVLALVMERPQVLTPAAAMEVTAIVAEVATAVLEWAPAIAAHVKVQFGGM
AYSSSPMLLHSVLTLFAQFPDAFGAEDERKVARRLASAACEAHRPLPVRLLALHWLLGSG
RFRDSVPGLAKWFYPGMFDPLALKAKKLDCLGFVAATVDSDKVEGGSYGQQTTKLIDDGL
VSVSAFRWLPAWSTETVVAFRGLHRVLVGAAPHSANDTGCSGAGELLNSTTFHHFQAMLV
DMASEHRGLVPVIADFINRLLACTAHRWVGEQLLRTVDECLLPRLEPGYQLASYYPLFEK
IAQNEAVPQLRLIELLTKQMASLAKKHDPDTELKSWSQGSKVVGICRIMLKHHHSSHIFL
PLTHLLVRTIESFPDLEIRDHARICLRMLSCIPGKKLRNLMGIGEQPTPSHPGSMFDDPS
ERPAQDPNSMPTLASYIHLERVVPLIVKQSWALTLPNFSVQSRASGHILSIQDVSVTPPE
QEKPPQPTIERIGYTEEALRVMDSKGAETLEILRRHFSCIPDYLHSSGGLKVKIHCTFRF
DSEPFNRAWVSDSPVPSSEGEDELPALYAVTITLSSSAQFGKIPPCRVPFLLGEPPGSGV
DIVPIDNCQQEESSYRASVMIELEPREPSPGLIDVEIAANTENFQVICGSLQPITVGIED
MFLKASVPPDTPKDGTTEYYQDLFHALWEACNSSSNTGRETFPLSGGKGLAAISGTRSVK
LLEVTPKVLIGALERYLSPFVVSVAGRSLITILRGNGVIENVMWEESDSDAAVGADALVP
YSMENNLQLQHIDDDEIGIGAQRFAHLSKRDMGVVRVLIFLPPRYHLLFSMEVGYASTLV
RIRTDHWPCLAYVDEYLEALLQ
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggagccccggccgtcgccgcagcagccgccgccgaccctcacggcgcaggagtgggag
cacctgctggacgacttcgccgccccgccccctcgccgcgaccggtggctccacctcccg
ctgctcgaccttgcgctctcctcgctgccccgccgcgacctcccctcccacctcaagccg
ctcctcctcgccttcgttgacgaccacctcctcccgccgcccgaccccgcgcgccaactc
ccgctcctcctcgcctccctcctcgccttccccgccgaccacccgctccgcgaccacctc
gtcgccaccgtcgcctccgccttcgcgtccgcgctctccgcgccgctgtccgacccggag
ggggaggccccgccgctcgcgggcctcgtcggcgcgctcctcgccgccgccaatcgcccc
aaccacgccaccgaccgcgccgcgcgcgccctcgcctgcgacgcgctcagggccctggac
gacgccctgccgggcctcctcgccgacgtgctcggccacgcctacgcgctcgcctccgcc
gagcgctcccccgccgcgcagtcctacatcctcctgctcgcctccgccgcgcgcggcgcc
gtccgcctcggcaggctcggatccggctcctcgatcctcgccgtctccggcccgcccgtc
ccgttctccgtgcccgcgcacctcctctccccgctgccgtcgccgcccgctccggtgccc
ccctcggagcagaacgtgagggagatcagaaaggtgctcgcgctggtcatggagagaccg
caggtgctgactcccgcggcggcaatggaggtcacagccatcgtggcagaggtggcgacg
gcggtgctggagtgggcgcctgccatcgcggcgcatgtcaaggtgcagttcggtgggatg
gcgtattcgtcgagcccgatgctgctgcactcggtgcttacgctgttcgcccagttcccc
gatgcgtttggggctgaggatgagcgtaaagtggcgcgccgcctagcttcggctgcctgc
gaggcgcaccggccactcccggtgcgattgctggcgttgcattggctgcttgggtccggg
aggttcagagattcagtgcctggacttgccaaatggttctatcctggcatgttcgacccc
ctggcgctgaaggccaagaagctggattgccttggatttgttgctgctaccgttgacagt
gataaggttgaaggaggcagttatggccagcagacgaccaaactcatcgatgatggctta
gtcagtgtttcggccttcagatggctccctgcatggagtactgagacagttgttgcgttc
cgagggctgcacagagtcttggttggtgctgctcctcacagcgccaatgacacgggttgc
tccggagctggtgagctcctgaattcaactaccttccaccatttccaggctatgttggtt
gatatggcatcagaacatcggggtttagtcccagtcattgctgatttcatcaaccgcctg
ctggcatgcacagcacatcggtgggttggggaacagttgctcagaaccgttgacgagtgc
ctgcttccgaggcttgaaccgggttaccagctcgcgtcttactaccctctttttgagaag
attgcgcagaatgaggcagtccctcagctccgcctaattgaattgctcaccaaacagatg
gcttctcttgccaaaaagcatgacccggacacagaactgaagtcctggtctcagggcagc
aaggttgtgggcatttgtcgtatcatgctgaagcaccatcacagctctcatatattcctt
cccctcacccacttactcgtgcgcaccattgagtcattcccagacctagagatccgggat
catgcaaggatatgtttgcggatgttgtcttgcattcctggcaaaaaactgaggaatctc
atgggaattggagagcaacccacaccctcgcatccgggttccatgtttgatgacccatca
gaacgccctgctcaagatcctaacagcatgcctactttggcatcgtacattcatcttgaa
agagttgtgcctctgattgtgaagcagtcatgggccctcacattgcctaatttcagtgtc
cagagcagagcgtctggtcacatcctaagcatacaggatgtgagtgtgactcctccagag
caagaaaagccaccacaacctaccatcgagagaattgggtatacagaagaagcactacgc
gtgatggattcaaagggggctgaaactttggaaatccttagaagacacttttcatgcatt
cctgactacctgcactcatctggcggtctcaaagtcaaaatacattgcacatttaggttt
gattcagagccatttaacagagcttgggtatctgattcacctgttccaagttctgaaggg
gaagatgagttgcctgccctttatgcagtgacaattaccttgtcgtctagtgcgcagttt
ggaaaaatccccccatgtcgtgtgccttttcttttgggtgagcctccaggttccggtgtg
gatattgtccccatagataactgccagcaggaagaatcaagttaccgtgcatcagtaatg
atagaactggagcctcgagagccatcacctggtcttattgacgtcgaaatcgcagcaaac
acagagaacttccaagtcatttgtggttctcttcagcccattacagtaggcatcgaggac
atgtttttgaaggccagtgtacctcctgatactccgaaagatggtacaactgagtattac
caggacctgtttcatgctctatgggaggcctgtaacagttcctctaacacaggtcgtgag
accttcccattgagcggagggaaagggttagctgcgatcagtggaacccggtctgtcaag
cttcttgaggtgactccaaaggttctgataggagctcttgagagatacctgtctcccttt
gttgtcagtgttgctgggcgttcacttatcaccattctaagaggtaatggggtcattgag
aatgtcatgtgggaagaaagcgactcagatgctgctgttggtgctgatgcattggttcca
tactccatggaaaacaatctccagcttcagcacattgatgatgacgaaattgggattggt
gcgcagaggtttgctcatctaagcaagagggatatgggtgtcgtgcgcgttctgatattc
ctgccacccaggtatcacctcctcttctcaatggaagtaggctatgcctctacactggtc
aggattagaacagatcattggccatgtttggcatatgttgatgaatatttggaggcgttg
ctgcaatag
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