Hordeum vulgare subsp. vulgare (domesticated barley): 123406061
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Entry
123406061 CDS
T11213
Name
(RefSeq) eukaryotic initiation factor 4A-1
KO
K03257
translation initiation factor 4A
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123406061
03012 Translation factors [BR:
hvg03012
]
123406061
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123406061
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123406061
mRNA cycle factors
Stress granule specific factors
123406061
Translation factors [BR:
hvg03012
]
Eukaryotic type
Initiation factors
eIF-4
123406061
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123406061
Exosomal proteins of bladder cancer cells
123406061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF2780
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
123406061
NCBI-ProteinID:
XP_044955491
UniProt:
A0A8I6Y2R8
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Position
6H:59248493..59252949
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AA seq
414 aa
AA seq
DB search
MAGMAPEGSQFDAKHYDSKMTELLNQGDTEEFFTSYDEVHESFDDMGLQENLLRGIYAYG
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR
PDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
PENYLHRIGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatggcaccagagggttcccagtttgatgctaagcactatgacagtaagatg
actgagttactgaaccaaggtgacactgaggagtttttcacctcatatgatgaggtgcat
gaaagttttgatgacatgggcctccaagagaaccttcttagaggcatctatgcttatggt
tttgagaagccatcagccattcagcaaagaggaattgttcccttctgcaagggtcttgat
gtgattcaacaagctcagtctggtacaggaaaaactgccaccttctgttctggaatcttg
cagcagcttgactatggattggttgagtgccaggcattggtccttgctccgacccgtgag
cttgcacagcagattgagaaggtcatgcgtgctcttggtgactacttaggcgtcaaggtg
catgcatgtgttggtggaacttctgtccgtgaggatcagaggattcttgccagtggtgtg
catgttgttgtcggcacacctggtcgtgtgttcgatatgttgcgcaggcaatccctccgc
ccagataacatcaagatgtttgtgttggatgaagctgatgagatgctatcacgtggtttc
aaggatcagatctatgatatcttccagcttcttccatcaaagattcaggttggggtgttc
tctgctaccatgcctcctgaggctcttgagataacccgcaagttcatgaacaagcccgtg
aggattcttgtcaagagagatgagcttacccttgagggtatcaagcaattctatgtcaat
gttgagaaggaagagtggaagctggacacactctgtgacctgtacgagaccttggcaatt
acccagagtgtcatctttgtgaacacccgccgcaaggtggactggctcaccgacaagatg
aggggaagggaccacactgtctctgcaacacacggagacatggaccagaacactagggac
atcatcatgagggagttcagatctggctcttctcgtgtgctcatcaccaccgacctgctg
gcccgtggtattgatgtgcagcaagtctcccttgtcatcaactatgacctgccgacccag
cctgagaactacctccatcgcattggtcgtagtggtcggttcgggaggaagggagttgcc
atcaacttcgtcacccgtgaagatgagaggatgctgttcgacatccagaagttctacaac
gtggtcattgaggagctcccggccaatgtcgccgaccttctctag
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