Hordeum vulgare subsp. vulgare (domesticated barley): 123406204
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Entry
123406204 CDS
T11213
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03440
Homologous recombination
hvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123406204
03460 Fanconi anemia pathway
123406204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvg03032
]
123406204
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123406204
Enzymes [BR:
hvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123406204
DNA replication proteins [BR:
hvg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
123406204
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
123406204
Bloom's syndrome complex (BTR)
123406204
FA (Fanconi anemia) pathway
123406204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
123406204
NCBI-ProteinID:
XP_044955614
UniProt:
A0A8I6Z416
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Position
6H:complement(528501858..528507352)
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AA seq
763 aa
AA seq
DB search
MKKALPLKGGSAGSRHGTKSPKELESVLKQYFGYSEFRGRQLEAIEAVLSGRDCFCLMPT
GGGKSMCYQIPALVKTGVVLVISPLIALMENQVSSLKSKGIPAEFLSSTQTTANKNKIHE
DLDSGRPSLKLLYVTPELVATSGFKAKLTKLHNRGLLGLVAIDEAHCISTWGHDFRPSYR
KISSLRKQFPDIPILALTATAVPKVQKDVISSLSLQNPVILKASFNRPNIFYEVRYKDLL
DDVYSDISNLLKSSGNVCSIIYCLERAACDDLTMHLSQQGISSAAYHAGLNSKVRTTVLD
DWLSSRTQVVVATVAFGMGIDRQDVRIVCHFNLPKSMESFYQESGRAGRDQQPSRSVLYY
GLEDRRRMEFILRNSSSRKQQPPSSSTELSEKTLADFSQIVDYCESSTCRRKKIIESFGE
KVQPTLCQRTCDACKHPNQVASRLEDLRRVPNSRFNKISPVFKTSSVDPKHFDTEFWNRE
DDVSRSDEDISDSDDEEEALSNVAISKLPSKGGFEARLEALERAENAYNQAKGQTKPQGG
NLVDKKSISQALRDASRKRLSGALGQAKLRLEDLRFAEEASAAHLETECFKKYQKVGKTF
YNSQIAATVRWLSSSSSEQIHDRLEALTNQSTDHGAAAGSSPCIIPDALGEAEKPAVATV
SHKFAETEPSDEFAKTVVSTEHMEPSKMSPPEKSIGEEGRRDRTIGTMDLPKIPSFREFM
SQKGRDRATSSSRAESQPRGVPRKAGPVISKEGGTGTSKKMKL
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcgcttcccctgaaaggcgggtcggcaggctctaggcatggaacgaaatct
cccaaggagctggagagcgtcttgaagcagtattttgggtactcggagttccgaggaagg
cagctggaggccatagaggctgttctttcaggaagggattgcttctgtttgatgccaact
ggaggtggcaagtcaatgtgctaccaaatccctgctctagtgaagacaggcgttgttctt
gttatctcacccttgatagcgctaatggagaatcaggttagcagcttgaaaagtaaagga
attccagctgaatttctctcttcgacacagacaacagctaacaaaaacaagatacatgaa
gatctcgattctggccgtccttctttgaaattgttgtatgtcactcctgagttagttgca
acatctggcttcaaggcaaagttaacaaagctccacaacaggggtcttcttggtcttgtt
gctattgatgaggctcattgtatatcaacttggggccatgatttcagacctagctaccgc
aagatttcatcattgaggaagcagttccccgatatcccaatattggctttgactgcaact
gctgtcccaaaagtccagaaagatgtgatatcatcattgtccttgcaaaacccagtcatt
cttaaagcttcctttaatcgacctaatatcttctatgaagttcgttacaaggatcttctt
gatgacgtttattctgatatatcgaatttactgaagtccagcgggaatgtttgctcaatc
atatattgccttgaacgtgctgcctgtgatgatctgactatgcatttgtcgcagcagggc
atctcttctgctgcttatcatgctggcctgaatagtaaagtacgaactaccgttcttgat
gactggctttcatcaaggactcaagttgttgttgcaactgtagcatttggaatgggtatt
gatagacaagatgtccgcattgtgtgccatttcaacttgcctaagtcaatggaatctttc
taccaggagtccggacgcgctggtcgtgaccaacagccttccaggagtgttttgtattat
gggttggaggaccgaaggagaatggaatttattttgagaaacagcagcagtagaaaacaa
cagccaccttcttcttcaactgagctttcagagaagaccctagccgactttagtcagata
gttgattattgtgagagttctacctgccgacgaaaaaagattattgagagttttggagaa
aaggtacaaccaactttatgccaacgcacatgcgatgcttgcaagcacccaaatcaagtg
gcctcacgtttggaggaccttcggcgtgtgcccaactctcgctttaacaagatatctcca
gtcttcaaaacctcatcagttgacccaaaacactttgacacggaattttggaaccgtgaa
gatgacgtaagcagatcagacgaagatatatcagattctgatgatgaggaagaggccctg
agcaatgtcgccatttcaaagcttccatcaaaaggagggttcgaagcaagacttgaggcc
ttggaacgtgctgaaaatgcttacaatcaagccaaaggtcaaactaaaccgcagggtggc
aaccttgttgacaagaagagcatatctcaggctctaagagatgcaagcaggaaaagattg
tcgggtgcgcttggacaagcaaagctccgtcttgaggatctgcggtttgccgaagaggct
tctgccgcgcaccttgaaacagagtgcttcaagaagtatcagaaagtggggaagacgttc
tataactctcagatagcagccacggttcggtggctgtcgtcttcaagttctgaacaaatc
catgaccgccttgaagcccttaccaatcagagtacagaccatggtgcagcagccggcagc
tccccttgcatcattcctgatgccctgggtgaagcagaaaagccagcagttgccactgta
agccacaagttcgcagaaacagagccttctgatgagttcgcgaagaccgtggtttcaact
gaacacatggagccttccaagatgtcaccacccgagaaatccataggcgaagaagggaga
agagatcgcacgatcggtaccatggaccttcccaagataccatcgttcagagaattcatg
agccagaagggaagggatcgcgcaaccagctcttccagggcagagagccagcctcgcggc
gttcctagaaaggctggtcctgtgatcagcaaagaaggagggacaggaacatcaaagaaa
atgaaactatga
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