KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123406288
Entry
123406288         CDS       T11213                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A0-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123406288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hvg03019]
    123406288
   03041 Spliceosome [BR:hvg03041]
    123406288
Messenger RNA biogenesis [BR:hvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     123406288
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123406288
Spliceosome [BR:hvg03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    123406288
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_11 Nup35_RRM_2
Other DBs
NCBI-GeneID: 123406288
NCBI-ProteinID: XP_044955713
UniProt: F2D3D5 A0A8I6YCR7
LinkDB
Position
6H:209198445..209202456
AA seq 413 aa
MAGYPEDNQHAMNGYEDEVEEVEEVDEEGHPGRRGRRDVGDGGGYGDAGGDDGRAGGGDS
SGKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL
EDEHNIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSSYGNVVEH
QIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHSSNG
RSSHSGGGGYRSSYRSGGAAAGGGSSSAGGGGYGYGAGGHRSAAAGSYYDSTGYGYGRGG
YGAAAAAAAYGGNAGYGSGFGGGYGGSMYGGAYGAYGPYGGGAYGAGAYGGGAYGGGAYG
GGAYGGGAPGGYGAGGYGSYGGAGAGAGAGGAGGGGGGSAGGRGSSRYHPYGK
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggcggggtatccggaggacaaccagcacgccatgaacgggtacgaggatgaggtcgag
gaagtggaggaggtcgacgaggagggccaccccgggaggaggggacggcgagatgtgggc
gatggtggtggctatggtgacgccggtggggatgacgggagggctgggggcggtgattcg
tcggggaagattttcgtcggaggcgttgcatgggagacaactgaagaatcattctccaag
cattttgggaagtatggggctataactgattctgtaattatgaaggacaagcatactaag
atgcctcgtggatttggatttgttacattttctgatccatctgtaatagacaaggttttg
gaggatgaacacaatatagatggaagaacggttgaagtcaaaaggacagtcccgagggaa
gaaatgtcctcaaaagatggccccaagacaagaaagatctttgttggtgggctaccatca
acactaactgaagatgatttgagggatcacttttcctcatatggcaacgtggttgaacat
cagataatggtggatcacagcactggccgttcgagaggttttggttttgtcacttttgaa
agtgaggattctgtcgaaagggtcatatccgagggaagaatgcgtgatcttggtgggaag
caggttgaaataaagaaggctgaaccaaagaaacatggtggtgatcacagtagcaatggg
agatctagtcactctggtggtggtggttaccgtagttcttaccgtagtggtggagctgct
gctggtggtggcagtagcagcgctggtggcggcggctatggctatggtgctggtggtcat
cggtctgctgctgcaggaagttattatgatagcacgggatatggttatggtagaggaggc
tatggtgccgccgctgctgccgctgcctatggaggcaatgctggatatgggtctggtttt
ggtggtggctatggaggctctatgtacggtggtgcttatggtgcatacggaccatatggt
ggtggtgcctatggtgcgggtgcttatggaggcggtgcctatggtgggggtgcttatgga
ggtggtgcctatggcggcggcgctcctggtggctacggtgctggtggatatggtagttat
gggggagcaggagcaggggcaggagcagggggtgctggtggtggtggtggtggaagtgca
ggtggtcggggctctagcaggtaccatccctatgggaaatga

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