Hordeum vulgare subsp. vulgare (domesticated barley): 123406309
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Entry
123406309 CDS
T11213
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123406309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hvg02000
]
123406309
Transporters [BR:
hvg02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
123406309
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Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
123406309
NCBI-ProteinID:
XP_044955729
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Position
6H:2941639..2946882
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AA seq
567 aa
AA seq
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MKSLLGEERSFIIESDDDDDEEDPIHKDGAGGSSSDSSSCASPRGGSGGGGGDSQPNSYT
NQWPQSYRQSIDILSSVQSPSLGFLGTPTLSRLSNSFLNSSFLNNSFRGKTPEVISNLVK
PLIRPTTSDEQQQQQQHHEDIRKSSQYLLPSRKPSLQQIPEDQKPLVVGHEVSPYQQCSY
TQGAMNGINVLCGVGILSTPYAIKQGGWIGLVILIVFALLAWYTGVLLRRCLDSKEGLQT
YPDIGHAAFGTTGRIAISIILYVELYACCIEYLILESDNLSKLFPNVHLNIWGLAINSHV
FFAILTTLVVMPTTWLRDLTCLSYISAGGVVASILVVICLCWIGVVDHVGFENKGTALNL
PGIPIAIGLYGYCYSGHGVFPNIYSSLKNRNQFPSILFTCIGFSTILFTAAAVMGYKMFG
ESTESQFTLNLPENLVVSKIAVWATVANPITKYALTITPLAMSLEELLPRSQQKYSNIII
LRSALVVSTLIIALSVPFFALVMALIGSLFAMLVTYILPCACFLAILKAKATWYQTATCS
FIIAVGVTCACVGTYSSLSGIVQNYST
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcctgctgggggaggagcggagcttcatcatcgagagcgacgacgacgacgac
gaggaggaccccatccacaaggacggcgccggcggctcctcgtcggactcgtcgtcgtgc
gccagcccgcgcggagggagcggcggcggcggcggcgacagccagcccaactcctacaca
aaccaatggccgcagagttacaggcaatcgatcgacattttgagcagcgtgcagtcgccg
agcctgggttttctggggaccccgacgctcagcaggctgtccaactccttcctcaacagc
tccttcctcaacaactcgttccgaggcaaaacccctgaggtcatctccaacctcgtcaag
ccgcttatacggccgacaacaagtgacgagcaacagcaacaacaacagcatcatgaagat
atcaggaagagctcgcagtaccttctaccgtcgaggaagccgtcgctgcagcagattccc
gaggatcagaagcccctggtggttggtcatgaggtttctccctaccagcaatgctcttac
acccagggagccatgaacggcataaatgttctttgtggtgtcggaatcctttcaacgcct
tacgccatcaagcaaggcgggtggatcggactggtgatactgattgtatttgctctgctc
gcatggtacaccggtgtgctgctgcgccgttgcctggacagcaaggagggccttcagaca
tacccagatatcggtcatgccgcctttggcaccaccggtcgcatagccatctcgataatc
ctgtatgtggaactgtatgcctgctgcatcgagtatttgatactggaaagcgacaattta
tcgaagttgttccccaacgtacacctgaacatttggggcttggcaataaactcgcatgta
ttcttcgcaatcttgacgactcttgtggtcatgccgaccacttggctccgtgaccttacc
tgcctgagctatatttcagctggaggtgttgtggcatcaatccttgtagtcatctgcttg
tgctggattggggttgtcgaccatgtcggctttgagaacaaagggactgcgctaaacctc
ccggggattcctatcgcaattgggctgtacggttactgctactcgggccatggggtgttc
ccaaacatctactcttctctgaagaatcgcaaccagtttccctccattcttttcacttgc
attggattctccaccattttgtttactgccgccgctgtgatgggatacaaaatgtttggt
gaatccactgagtctcagttcacgctcaacttaccggagaatctggtggtttccaagatt
gccgtctgggctacggtggcaaatccaataaccaaatatgcattgacaataaccccactg
gccatgagtctggaagagttgctgccgcgaagtcagcagaagtactccaacataatcatt
cttagatcagccctggtggtgtcaacgctcatcattgctctgtcagttcccttctttgca
cttgtgatggctctgattggttctctattcgcgatgcttgtgacctacattctaccttgt
gcctgctttctggccatccttaaggcaaaagcgacttggtatcagactgcaacatgctca
ttcatcatcgccgtaggggtgacctgcgcctgcgtggggacatactcatcactctctggg
attgtccagaactactccacctga
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