Hordeum vulgare subsp. vulgare (domesticated barley): 123406333
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Entry
123406333 CDS
T11213
Name
(RefSeq) uncharacterized protein LOC123406333
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123406333
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123406333
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123406333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_10
zf-rbx1
RING_XB3-XBAT31
Prok-RING_4
zf-RING_6
zf-Nse
Zn_ribbon_6
zf-RING_4
Sina_RING
TRAF3_RING
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
123406333
NCBI-ProteinID:
XP_044955764
UniProt:
A0A287UZ65
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All DBs
Position
6H:complement(534094338..534097713)
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AA seq
227 aa
AA seq
DB search
MSNTSGARRAARRQLQDGSADKVVVDLDASSPVAGNPHGLSVFPGARTSPIDVEALDDEV
QALSPSQVPPPGVNRRTRGQPVTPFSLDEDAILEENWRIIRQCTTPFYFDEDAALEAMPS
HNTWNKRQRVAPLICLSPERGEGSSLQSNNAVTISQEPAKVVVPKEPNFTCPVCLNKLVE
PSTTKCGHIFCTECIKQAIQFQKKCPTCRKALRKNNFHRIYLPNSDG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccagcggcgcacggcgtgccgcgcggaggcagctgcaagatgggtctgct
gataaagttgttgtggacttggatgcaagctcgccggtggcggggaaccctcatgggttg
tcggtcttccctggtgcacgcacatcgcctattgatgtggaagctcttgatgatgaggtg
caggcgctatctccttcacaagtacctcccccgggggtgaaccggagaactagagggcaa
cccgtgacaccattttctctggatgaagatgctatcctggaagagaattggagaattata
aggcaatgtacgacgccattttatttcgatgaagatgctgccttggaagctatgccttct
cacaacacgtggaacaaacgccaaagggttgcccctttgatatgtctctccccagaaagg
ggagaagggtccagcctgcagtcgaataatgcggtgacaattagtcaagagcctgctaag
gtggtggttccaaaggaaccaaatttcacttgcccggtgtgccttaataagctagtggag
ccttcaacaacaaaatgtggccatatcttctgcaccgagtgcatcaagcaagccatccag
ttccagaagaaatgccctacctgccgcaaggccctgaggaagaacaacttccatcgtatt
taccttccgaactcggatggttaa
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integrated database retrieval system
