Hordeum vulgare subsp. vulgare (domesticated barley): 123406939
Help
Entry
123406939 CDS
T11213
Name
(RefSeq) starch synthase 1, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00500
Starch and sucrose metabolism
hvg01100
Metabolic pathways
hvg01110
Biosynthesis of secondary metabolites
Module
hvg_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
123406939
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hvg01003
]
123406939
Enzymes [BR:
hvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
123406939
Glycosyltransferases [BR:
hvg01003
]
Polysaccharide
Storage polysaccharide
123406939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
123406939
NCBI-ProteinID:
XP_044955889
LinkDB
All DBs
Position
7H:complement(44060397..44067768)
Genome browser
AA seq
643 aa
AA seq
DB search
MAATGVGAGCLAPSVRLRADPAARATACVVRARLRRVARGRYVAELSREGPAARPAQQLA
PPVVPGFLAPPPPAPAQSPAPTQPPLPDAGVGELAPDLLLEGIAEDSIDTIVVAASEQDS
EIMDANDQPLAKVTRSIVFVTGEAAPYAKSGGLGDVCGSLPIALAARGHRVMVVMPRYLN
GTSDKNYAKALYTGKHIKIPCFGGSHEVTFFHEYRDNVDWVFVDHPSYHRPGSLYGDNFG
AFGDNQFRYTLLCYAACEAPLILELGGYIYGQSCMFVVNDWHASLVPVLLAAKYRPYGVY
RDSRSTLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKG
AVVTADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPTTDKCLP
HHYSVDDLSGKAKCKAELQRELGLPVREDVPLIGFIGRLDYQKGIDLIKMAIPDLMREDV
QFVMLGSGDPVFEGWMRSTESSYKDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLN
QLYAMQYGTVPVVHGTGGLRDTVETFNPFGAKGEEGTGWAFSPLTVEKMLWALRTAISTF
REHKPSWEGLMKRGMTKDHTWDHAAEQYEQIFEWAFVDQPYVM
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgggcgtcggcgccgggtgcctggcccccagcgtgcgcctgcgcgccgat
ccggcggcgcgggcgaccgcctgcgtcgtccgcgcgcggctccggcgcgtggcgcggggc
cgctacgtcgccgagctcagcagggagggcccggcggcgcgccccgcgcagcagctggcc
ccgcccgtcgtgccaggcttcctcgcgccgccgccgcccgcgcccgcacagtcgccggcc
ccgacgcagccgcccctgccggacgccggcgtgggggaacttgcccccgacctcctgctc
gaagggattgctgaggattccatcgacaccatagttgtggctgcaagtgagcaggattct
gagatcatggatgccaacgaccaacctctagctaaagttacacgtagcatcgtgtttgtg
actggtgaagctgctccttatgcaaagtcaggggggctgggagatgtttgtggttcgttg
ccaattgctcttgctgctcgtggtcaccgtgtgatggttgtaatgccgagatacttaaat
gggacctctgataaaaactatgcaaaggcattatacaccgggaagcacattaagattcca
tgcttcgggggatcacatgaagtcaccttttttcatgagtatagagacaacgtcgattgg
gtgtttgttgatcatccatcatatcatagaccaggaagtttgtatggagataattttggt
gcttttggtgataatcagttcagatacacactactttgctatgctgcttgtgaggcccca
ctaatccttgaattgggaggatatatttatggacagagttgcatgtttgttgtgaacgat
tggcatgccagccttgtgccagtccttcttgctgcaaagtatagaccatatggagtttac
agagattctcgcagcactcttgttatacataatttagcacatcagggtgtggagcctgca
agtacatatcctgatctgggattgccacctgaatggtatggagctttagaatgggtattt
ccagaatgggcaagaaggcatgcccttgacaagggtgaggcggttaactttttgaaaggt
gcagttgtgacagcagatcgaattgtgaccgtcagtcagggttattcatgggaggtcaca
actgctgaaggtggacagggcctcaatgagctcttaagctcccgaaaaagtgtcttgaat
ggaattgtaaatggaattgacattaatgattggaaccccaccacggacaagtgtctccct
catcattattctgtcgacgacctctctggaaaggccaaatgtaaagctgaattgcagagg
gagctgggtttacctgtaagggaggatgttccactgattggctttattggaagactggat
taccagaaaggcattgatctcattaaaatggccattccagatctcatgagggaagacgta
cagtttgtcatgcttggatcgggggatccagtttttgaaggctggatgagatctaccgag
tcgagctacaaggataaattccgtggatgggttggatttagtgttccagtttcccacaga
ataactgcaggttgcgatatattgttaatgccatccagatttgaaccttgcggtcttaat
cagctatatgctatgcaatatggtacagttcctgttgttcatggaactgggggccttcga
gacacggtggagaccttcaacccttttggtgcaaaaggagaggagggtacagggtgggcg
ttctcaccactaaccgtggaaaaaatgttgtgggcattgcgaaccgcgatttcgacgttt
agggagcacaagccctcctgggaggggctcatgaagcgaggcatgacgaaagaccatacg
tgggaccatgccgccgagcagtacgagcagatcttcgagtgggccttcgtggaccaaccc
tacgtcatgtag
DBGET
integrated database retrieval system
