Hordeum vulgare subsp. vulgare (domesticated barley): 123407114
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Entry
123407114 CDS
T11213
Name
(RefSeq) U-box domain-containing protein 12
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123407114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123407114
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123407114
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
U-box type E3
123407114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_EZ
zf-RING_UBOX
Cnd1
HEAT_2
zf-C3HC4_4
Arm_2
ARM_LIN_C
zf-Nse
ARMC9_ARM
zf-C3HC4_2
CvfB_WH
KAP
zf-C3HC4
Insc_C
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
123407114
NCBI-ProteinID:
XP_044956102
UniProt:
A0A8I6Y9M9
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Position
7H:605299..607811
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AA seq
603 aa
AA seq
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MAAATAAAEIAALPEPRGPLRRLCGDLSRRVRLLAPLLDDPSASASPPLADALRAARDLL
HSVHHGSKIYQAMRGRDSLLREFAAVNEQIQAALDQLPYNDFDMPEEVQEQVALVHSQFK
RAATRAESADPQLARDLAWALSDDKPSVPALLMRVSEKLQLETMTDMKRESVALHEMVIS
SGGEPDGCVEEMSSLLKKLNDCVITQAPAAGEAPGMGRSPSVKSPIIPDEFRCPISLELM
QDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQLALTHTSLTPNFVLKSLIAQWCEANGIE
LPKNKANSHDKKAVKSSDYDNAGLISLMNRLRAGNQDEQRAAAGEIRLLAKRNVNNRICI
AEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSNAIPKIVEVLKTGSME
ARENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNK
VRAVKAGIITHLMNFLVDPTGGMIDEALTLLSILAGNQEGKAVITQSEPMPPLIEVVRTG
SPRNRENAAAILLSLCSADAEQTMAAKVAGGEDALKELSETGTDRAKRKASSLLELMRQS
EDA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgacggccgccgccgagatcgctgcgctgccggagccgcgcggccccctg
cgccgactctgcggcgacctctcccgccgcgtccgcctcctcgccccgctcctcgacgac
ccctccgcctccgcctcgccccccctcgccgacgcactccgcgccgcccgtgacctcctc
cactccgtccaccacggcagcaagatctaccaggccatgcgaggccgggacagcctcctc
cgcgaattcgccgccgtcaacgagcagatccaggccgcgctcgaccagctgccctacaac
gacttcgacatgcccgaggaggtccaggagcaggtggcgctggtgcactcgcagttcaag
agggcggcgacgagggcggagtcggccgacccgcagctggcgagggacctggcctgggcg
ctcagcgacgacaagccgtccgtgccggccctcctcatgagggtctctgagaagctgcag
ctcgagaccatgaccgacatgaagcgcgagtcggtggcgctgcatgagatggtcatctcc
agcggcggcgagcccgatgggtgcgtcgaagagatgtcctccctgctcaagaagctcaat
gactgcgtcatcacccaggcccccgccgctggcgaggctcccggcatgggcaggtctccc
tctgtcaagtcgcctatcatacccgacgagttcagatgccccatttcgctcgagctgatg
caggaccccgtcatcgtctccagcggccagacgtacgagcggtcctgcatccagaagtgg
cttgattctgggcacaagacctgccccaagacgcagctggccctcacgcatacttccctc
acaccaaactttgtcctcaaaagcttgatagcgcagtggtgcgaagccaatggcatcgag
cttcccaagaacaaggccaattcccatgacaagaaagcggtgaaaagttccgattatgat
aatgctggcctgatctcgctgatgaataggctgcgggcagggaaccaagacgagcaacgg
gcagctgcgggggagatccgcttgcttgcaaagagaaacgtgaacaaccggatatgtata
gctgaagcaggagccattccgttgctggtcaatctgctctcctcttctgacccaagaacg
caggaacatgctgtcacagcacttcttaacctctccatccatgagaacaataaggcaagc
atcgtggactccaatgccatccctaagatagtagaagtgctgaaaactgggagtatggaa
gccagagagaatgcagcagccacgctgtttagcctgtcagttgtggatgaaaacaaagtg
actatcggcgctgctggcgcgatacctccgctcatcaatctcctgtgcgacgggagccca
agaggcaagaaagatgcggcaacggcaattttcaacctgtgcatatatcagggtaataag
gtccgggcggtgaaagctggaatcatcacccatctgatgaacttcttggtggatcctact
gggggcatgattgatgaggcactcactcttttgtcgattcttgccggtaaccaagaaggc
aaggctgtaatcacacaatcagagccaatgcctccactaatcgaggtggtcagaaccggg
tctcctcgcaatagagagaacgcagcagccattctattgtctctttgctctgccgatgct
gaacaaaccatggctgcaaaggtagctggaggggaagatgcactcaaggagctgtctgaa
accggcacagaccgcgcaaaaaggaaagcttctagcttacttgaactcatgcgccaatca
gaggatgcatga
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