Hordeum vulgare subsp. vulgare (domesticated barley): 123407172
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Entry
123407172 CDS
T11213
Name
(RefSeq) pre-mRNA-splicing factor CWC25 homolog
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123407172
Spliceosome [BR:
hvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123407172
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Gene cluster
GFIT
Motif
Pfam:
Cir_N
CWC25
Motif
Other DBs
NCBI-GeneID:
123407172
NCBI-ProteinID:
XP_044956184
UniProt:
F2DKE8
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All DBs
Position
7H:complement(164654746..164657829)
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AA seq
605 aa
AA seq
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MGMKFLNKKGWHTGSLRNVEKVWVAEQKEKEEQHKIEEYKKQLKEEREKAEFRAIQEQAG
FKPRQERLEFLYESGLGVGKGSSDGFQALQQPAPAAAAAASSSAPTTAGSSKDTSLGALF
EEKPQSANDTWRKLHSDPLLLIRQREQDAIARIKNNPIKMAEIKKSMEAEKKQKEEKKER
RKHKKHRHHKSKSKRHHSAENSDSDDVSDGKDEGRKKVPSAPEHKREVKRSRHQKKENSQ
ESSDTEDDEPRKRRHEISEDDQPKRRRQDKSQGDEPRRRRRDTPEDAGRRRQREKSQDDE
PRRRRRDMPEDDEPRRRRRDTPERDEPRRRRQDTPEDDEPRRRGRDMPDNDEPVRRRRDM
PEDAEPVRRRHDMPEDDEPMRRRPEMSRHDDHPRRDRSDADDRRRHNSGSDRHHAYPKHD
SSDSKQKSIGNGRNNSNSTSEHRSHSEVVSGDQGRQDSQQGRELGTQDRRRPESQQGREL
CSEDRRRQESQQGRNNGPLTNRRRGGVLHMSEEEREARLRQMQADAEVHEEQRWKRIKKA
ADEDAKEASTVAANQFRGKNFLEDEKKSIFGADKGGSATIEESIRRRAYYSQGGGDAHEA
NAFRR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaaatttctgaacaagaaggggtggcacacggggagcctccgcaacgtggag
aaggtgtgggtggcggagcagaaggagaaggaagagcagcacaagatcgaggagtacaag
aagcagctcaaggaggagagggagaaggctgagttccgcgccatccaggaacaggccgga
ttcaagccgaggcaggagaggttggaattcctctacgagtcaggcttgggcgtgggcaag
gggagctcggatggattccaagcactgcagcaacccgccccagcggcggcagctgcggcc
tcctcttctgctccaacgactgctggctcttccaaggacacttccctgggagctctattt
gaggagaagcctcaatctgcaaatgacacatggagaaaacttcactctgatcccctactc
ctaataaggcagcgggagcaggatgctattgcaaggattaaaaataatccaatcaagatg
gccgagataaagaaatcaatggaagcagaaaaaaagcagaaggaagaaaagaaagagagg
agaaagcacaaaaaacatcgtcatcataagtcaaagagtaagaggcatcactcggctgaa
aattctgattcggatgacgtaagtgatggcaaggacgaagggagaaagaaagttccttct
gctcccgagcataagagggaagtgaaaaggtcaaggcatcagaagaaagaaaacagtcaa
gaatcctcggatacagaagatgatgaaccaaggaaaagaaggcatgagatttcagaagat
gaccaaccaaagagaagacgacaagacaagtcacaaggtgatgaaccaaggagaagacgg
cgggatacgccagaagatgctggacggcgaagacagcgggaaaaatcacaagatgatgaa
ccaaggagaagacggcgggatatgccagaagatgatgaaccaaggagaagacgacgtgat
acgccagaaagggatgaaccaaggagaagacgacaggatacgccagaagatgatgaacca
aggagaagagggcgggatatgccagacaatgatgagccagtgagaaggcggcgggacatg
ccagaggatgctgaaccggtgagaaggcgacacgatatgccagaagatgatgaaccaatg
agaagacgtccggagatgtccaggcatgatgaccatccacgtcgggatcggtcggatgct
gatgataggaggagacacaattctgggtcagaccgccatcatgcttatccaaagcatgac
agctcagactcgaagcagaaaagtattggaaatggccggaacaatagcaattccacttct
gaacaccgatcccactctgaagtcgtttcaggagatcaaggaagacaagacagccaacag
ggtagggaactaggtacacaagaccgccggagaccagaaagccagcagggcagggagcta
tgttcagaagacaggagaagacaagaaagccagcagggcaggaacaatggccccctaact
aaccgccgtcgagggggcgtgctccatatgtcggaagaggagagggaagcccgtctgcgg
caaatgcaggctgacgctgaggtccatgaagagcagaggtggaagaggatcaagaaggct
gcagacgaggacgccaaagaggcgtccacggtggctgcaaaccagtttagagggaagaac
ttcttggaggatgagaagaagagtatatttggtgccgacaagggcggcagcgccaccatc
gaagagagcatccgccgccgcgcttattattctcagggtggcggtgatgcccacgaggcc
aatgcgttcaggcgttga
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