Hordeum vulgare subsp. vulgare (domesticated barley): 123407429
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Entry
123407429 CDS
T11213
Name
(RefSeq) retinoblastoma-related protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123407429
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
123407429
BRITE hierarchy
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GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFIIB
Motif
Other DBs
NCBI-GeneID:
123407429
NCBI-ProteinID:
XP_044956497
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All DBs
Position
7H:complement(215692621..215699119)
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AA seq
1020 aa
AA seq
DB search
MDGADAPQPARSGSGVTASTAPGRMNGGASANANAAAMEERFADVCKRKLVLDESTTRQA
MQLFKETKIILLSSMSSLGSGSPEEIERSWSACVLYCVSKLGNAGKAKEDRAITLRQILR
AFELKIVDFFKEMPQFCIKVGFILTGLYGSDWEKRLELQELQANLVHLCSLGRHYRRAYQ
ELFLLNDGKPANNSSDLNLQQASEYYNFGWLLFLVLRNQASSAVKNLLTSTTELVSVLAV
LIIHIPVRLRNFSIEDSSCFAKKSEKGVNLIASLCERYLTSEDELSKALQKTNILITDIL
KKKPCSDVSECQQGCLSFIDPEGLVFFKNFLEEDSLKSSLQVLEREYENGLDTKGELDAR
MFANDEDSLLGSGSLSGGALKLPGTKRKYDDVMASPTKSTASRAPMSPPRFCPSPNGNSF
CNSKMAPFTPVSTAMTTAKWLRSTISPLPSKPSGELLRFFSACDKDVTDDITCRAAIILG
AIFTGSSFGERMCTSLRNTNGMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGSNLTS
LLSNERFHRCMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPR
ELKRHLNSLEERLLESMAWEKGSSMYNSLIVARPTLSLEINRLGLLAEPMPSLDAIAVHH
DISLGGLPPLPFQKQERSPGNKDEVRSPKRACTERRNVLADNSFRSPVKDAIKSKFLPPL
QSAFASPTRPNPAAGGETCAETGIGVFLSKITKLAAIRIKCLCERLQLSQQILERVYSLA
QQIISQQTALFFNRHIDQIILCCIYGVAKISQLALTFKEIIFSYRKQSQCKPQVFRSVYV
NWPSRSRSGKIGEDHVDIITFYNEVFIPTVKPLLVDLGPGTSPNRNNEPKSGGDAPFPES
PRLSRFPNLPDMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTHAFQSPSK
DLNAINTRLNSGKKVNGRLNFDVVSDLVVARSLSDQNDGSASAMAVFGTKTPVKGEQPDP
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggacggagcagacgcgccgcagcccgcgaggtcgggctcgggggtcacggcgtccacg
gccccggggaggatgaacggcggcgccagcgccaacgccaacgccgcggcaatggaggag
cgattcgctgatgtctgcaagaggaagctagtgctcgacgagagcaccacgaggcaggcg
atgcagctcttcaaggagaccaagatcatcctcctgtccagcatgtcatccctgggcagt
ggatcgcccgaggagatcgagaggtcctggtccgcttgtgttctttactgcgtgtcaaag
ctcggcaatgcagggaaggccaaggaagaccgtgccatcacgctgcgccagattttgagg
gcatttgaactcaagattgttgattttttcaaggagatgcctcagttctgcataaaggtt
ggattcattctgactggtctatatggttcagattgggagaagaggcttgagttacaggag
ctgcaagccaatcttgtccatttatgctccctaggccggcattacagacgagcataccag
gagctattcctgttaaatgatggcaaacctgcaaataattcttcagatctaaatttgcaa
caagcttctgaatattataactttggatggttactcttcttagttctgagaaaccaagca
tcaagtgctgtgaagaatcttttaacatccacaactgagttggtttctgtgctggctgtg
cttattattcatatccctgtgcggctaaggaacttcagtatcgaggattcgtcctgcttt
gctaagaagtcagagaagggagtcaatcttattgcatccctctgtgaaagatatcttacc
tcagaagatgagttgagcaaagcactgcagaagacgaacattctcataacggatatttta
aaaaagaaaccatgctcggatgtttcagagtgccagcagggttgtttatcctttattgat
ccagagggcttggtgtttttcaagaattttctcgaggaagattcattgaaatcaagtttg
caggtcctggaaagggaatatgagaatggacttgatacaaagggagaactagatgcacgg
atgtttgctaatgatgaggacagtttgcttggcagtggaagtctgtcaggaggtgccctt
aaattaccgggcacgaagagaaagtatgatgatgttatggcctcacctaccaaatcaaca
gcaagtcgagccccaatgtctcctccacgtttctgtccgtcacctaatggaaatagcttc
tgcaactcaaagatggctcctttcaccccagtaagcacagccatgacaactgccaagtgg
cttcggagtacaatatcgcccctcccttccaaaccttctggggagttgctgcgcttcttc
tctgcatgtgataaggatgtaacagatgacatcacatgcagagctgccattatacttgga
gccatattcacaggcagttcttttggtgagcgtatgtgtactagtttgcgaaacacaaat
gggatggatgctatctggacagagcaaaggaaaatggaagctcttaagctgtactataga
gttctggagtcaatgtgcagagcagagtcacagatcttgagtgggagcaatcttacgtca
cttctgtctaatgaacgattccatcgttgtatgattgcctgttctgctgagttagttctg
gccactcacaagacagtcacgatgatgttcccagctgtgctagagaaaactggcataaca
gcttttgacttgagcaaagtcatagagagctttgtgagacatgaagatacacttccgcga
gagttgaagcgtcatttgaattcacttgaggagcggcttctggaaagcatggcatgggag
aaaggctcctcaatgtacaattccttaattgttgctagaccaacattgtctctggaaata
aaccggctaggtttactggctgaaccaatgccttcgcttgatgctattgcggtgcatcat
gatatttcactggggggccttccacctcttccatttcagaagcaagaacgctcaccaggt
aataaagatgaagttagatcacctaaaagagcatgtactgaaaggagaaatgtgctggcg
gacaactcatttagatcaccagtaaaggatgccatcaaatcaaagtttctacctcctctt
caatcggcgtttgcaagcccaacaagacctaatccggcagcaggaggagaaacatgcgca
gagacaggaataggtgtattcttgagcaagattacaaaacttgcagccattagaatcaaa
tgtctctgtgaaagattgcaacttagtcagcaaattttggagcgagtatactcccttgcc
cagcaaattatcagccaacaaaccgctctctttttcaacaggcacattgaccagatcata
ctgtgctgcatatatggagttgcaaagatatctcaactggcccttaccttcaaggagatt
attttcagctacagaaaacagtctcagtgcaagccacaggttttccgtagtgtttatgtc
aattggccgtcaaggagccgcagtgggaaaataggagaggaccatgttgatatcatcact
ttctacaatgaagtatttattcctactgtcaagcctttgttggtggatcttgggcctggt
accagtccaaacagaaataatgagccaaaaagcggtggtgatgccccatttccagaatct
cctcggctgtctaggtttccaaaccttcctgacatgtctccaaaaaaagtttctgctact
cataatgtatacgtctccccgctacgatcgtcaaagatggacaccctgctttcgccgagc
tccaagagctattacgcatgcgtcggggagagcacccacgcatttcagagcccctccaag
gatctgaatgcgattaacacccgcctaaacagcgggaagaaagttaacggaaggctcaac
ttcgatgtggtgagtgatctggtggtggccagaagcctaagcgaccagaacgacggctct
gcttctgcgatggcagtctttggcaccaagacgccggtaaagggcgagcagccggaccct
tag
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