Hordeum vulgare subsp. vulgare (domesticated barley): 123407573
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Entry
123407573 CDS
T11213
Name
(RefSeq) uncharacterized protein LOC123407573
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123407573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123407573
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123407573
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123407573
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
zf-RING_5
Sina_ZnF
DUF4729
Motif
Other DBs
NCBI-GeneID:
123407573
NCBI-ProteinID:
XP_044956674
UniProt:
A0A8I6X0Q2
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All DBs
Position
1H:complement(86373977..86375260)
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AA seq
309 aa
AA seq
DB search
MDGIYTRIHLSETLLRLYTLVGQIKKVIMAPPWVPSVAAIANSSAEDMEEPLDCGICFLP
LHAPPVFMCEAGHLICSPCRGMLGLAVGMCHVCSAKAARPGSRRDDGRDVWPVYYAPRDR
IGALRGPCRCPDNACGFVGNTAALLCHFVSAHDWPVHAGVTSGDSIAVRLQDGINIVAVD
CIGGASEQDSPEFPGRYLLVLEVFQQTFGRTVFAFCLRPGAATMDGLIFWAKEAQCHLSL
SYSRNILDGDDDKPLVQCYYQTTKASVTCTDLSSGLPDAEDCFQAHVYRSVDLEDNEDTV
EVTLRVVIH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacggtatatatacgaggatccatctatctgagacccttcttcgactttatacccta
gtaggccaaataaaaaaggtaatcatggcgcccccgtgggttcccagcgtcgcggccatc
gctaactcgtcggcggaggacatggaggagcccctcgactgcggcatctgcttcctccca
ctccacgcgccgccagtcttcatgtgcgaagctgggcacctgatctgctcgccctgccgc
ggaatgctcgggctggccgtggggatgtgccacgtctgcagtgccaaggccgcccgcccc
ggctctcggcgggacgacggccgcgacgtctggccggtctactacgcgccccgcgaccgc
atcggcgcgctccgcgggccgtgccgctgcccggacaacgcctgcggcttcgtcggcaac
acggcggcgctcctctgccacttcgtcagcgcgcacgactggccagtccacgccggggtg
acctccggggacagcatcgccgtgcgcctgcaggacggcatcaacatcgtcgccgtggac
tgcatcggcggtgcctccgagcaagacagcccggaattccccgggcggtatctgctcgta
ctagaggtgttccagcagacgttcggccgcacggtctttgcgttctgcctacgtcccggt
gccgccaccatggacgggctgatcttctgggcgaaggaggcgcagtgccatctcagcctc
tcctactcgcgcaacatcctcgacggcgacgatgacaagccgctggttcaatgctactac
cagacaaccaaggccagcgtgacgtgcaccgatctctccagcgggctgcccgacgccgag
gactgcttccaggctcacgtgtaccggtccgtcgacctggaggataacgaagataccgtc
gaggtgacgctgagggttgtcatccactga
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