Hordeum vulgare subsp. vulgare (domesticated barley): 123408741
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Entry
123408741 CDS
T11213
Name
(RefSeq) probable RNA methyltransferase At5g51130
KO
K15190
7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123408741
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
123408741
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bin3
Methyltransf_12
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_31
PrmA
Methyltransf_18
Methyltransf_4
DUF5555
AviRa
MTS
FtsJ
Motif
Other DBs
NCBI-GeneID:
123408741
NCBI-ProteinID:
XP_044957723
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All DBs
Position
7H:221916106..221920227
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AA seq
313 aa
AA seq
DB search
MVTTGAPEDVALPPSAPKGPKGEAERKQSDAQGRGGNGGGGEGGGGGGRGKKRKNKEVFI
YGNYRNYYGYRIDRNVGEDPRLEIFKKEWFAGKDCLDIGCNQGLVTIGLAMKFECRSILG
VDIDKGLIETANWNLRRISRTGNVAPESAKVHNSSDSTTQSCREEVVSEMRNGNISKHEQ
PDLFKIVSFRSENFVQSTHRYAEQYDTIMCLSVTKWIHLNWGDDGITTLFVKIWSLLRPG
GIFIMEPQPWSSYRKNRLVSEVAKENFNDICIYPEKFREILLDKVGFRSAEVITNRLVGS
VAGFDRPIEVYHK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccacgggtgcgccggaggacgttgcgctgccaccttccgcgcccaaggggccc
aaaggagaggcggagaggaaacagagcgacgcacagggaagaggaggaaacggcggcggc
ggtgaaggtggcgggggtggaggtagagggaagaagcggaagaacaaggaggttttcatc
tacgggaactacaggaactactacggctaccgaattgatcgcaacgttggtgaagatccc
cgccttgagatattcaagaaggagtggtttgcaggcaaggattgtctcgatattggatgc
aaccaaggtttggtcacaatcggtctagcgatgaagtttgagtgtcgaagcatcctggga
gttgacatcgataaaggtttgattgaaactgctaactggaatttaagaaggatatctcga
acaggcaacgtggctccggaaagtgcaaaggttcataactcgtcagactccacaactcag
agctgtcgagaagaagtggtatctgagatgcgaaatggaaatatctctaagcacgaacaa
cctgatctttttaaaattgtctcttttcggtctgaaaattttgtacagagcacacacaga
tatgcagaacagtatgacaccatcatgtgtttgagcgtgacaaaatggatccacctgaac
tggggtgatgatggtataaccactttgtttgtgaagatatggagtcttctaagaccggga
gggatttttatcatggaacctcaaccttggagctcgtataggaaaaacagattagtgtca
gaggttgccaaagaaaacttcaatgatatctgtatatatcctgagaaattccgggagata
cttctggacaaggtaggattcaggtcagcagaggtgattaccaacagattggttggttct
gttgctggttttgaccgcccaattgaagtttaccacaaatga
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