Hordeum vulgare subsp. vulgare (domesticated barley): 123409648
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Entry
123409648 CDS
T11213
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123409648
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hvg02000
]
123409648
Transporters [BR:
hvg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
123409648
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
AAA_30
RsgA_GTPase
AAA_21
AAA_29
SRP54
AAA_25
AAA_28
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123409648
NCBI-ProteinID:
XP_044958439
UniProt:
A0A8I6YGX6
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All DBs
Position
7H:531996623..532013559
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AA seq
718 aa
AA seq
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MALSSWSMRLPYSPSRPTLGPRRSRLLFSPSGPILNSRPSRLPHLPATSHVPDSGRRRCL
RLGRPPHAYISAPAPGPDAYQSPSFDAAEAAADVAAAISSTDAITWAGVWALLSQHKARL
AISLAALLACTTCTLSMPLFSGRFFETLIGRGSEPLTRLLSKIAVLYTLEPIFTIVFVIN
MTVVWEKVMGRLRSQIFRRILIQKMVFFDRHKVGELTGLLTSDLGSLKGVVSDNISRDRG
LRAFSEITGTLCILFTLSTELAPVLGLLIVSVSVIVAIFKRSTVPTFKSYGIVQAHISDC
VSETFSAIRTVRSFGGEKRQISMFDNLALAFQNSGTKLGVLKAANESLTRVVVYVSLMAL
YILGGSKVSAGKLSIGTMASFIGYTFTLTFAVQGAVNTLGDLRGTFASIERINSVLSAKD
IDDSLAYGLAKELDNKETEDSNPRVHEKGTVNTHYMSALKSSSSCSDLAWSGDIHLEDVH
FSYPLRSDVDVLNGLDLVIECGKVTALVGSSGAGKSTVVQLLARYYEPTQGRITVAGEDI
RVFDKREWSQIVSLVNQDPVLFSASVGENIAYGLPDDVVSKDEIIKAAKAANAHEFIISL
PQGYDTLVGERGSLLSGGQRQRIAIARALLKNAPFLILDEATSALDTTSERLVQEALDLL
MKGRTSLVIAHRLSTVQNAHQIAVCSDGKIMELGTHAELVAKGGSYASLVGTQRLAFE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccagctggagcatgcgcctcccctacagcccctcccgccccaccctgggc
cctcgccgcagccgcctcctcttcagcccctccggccccatcctcaactctcgccccagc
cgccttccccacctccccgccacgtcccacgtccccgattccggccgacgccgctgcctc
cgcctgggccgcccgccccatgcgtacatctcggcgccggcgcccggccccgacgcctac
cagtccccttcctttgacgccgcagaggcggctgccgatgtggccgccgccatctcctca
actgacgccatcacctgggccggtgtctgggccctcctgtcgcagcacaaggcccgccta
gcgatctccctcgctgcgctcctcgcgtgcacgacctgcaccctctccatgccgctcttc
tcagggaggttcttcgaaaccctgatagggagggggtccgaacccttaacgaggctcttg
tccaaaattgcggtattatatacgctggagccgatatttaccatcgtctttgtgatcaac
atgactgtggtctgggagaaagtgatggggagactgcggagccagatatttcggaggatt
ctgatccaaaagatggtattttttgatcgtcacaaggtcggcgagctaactggattgttg
acatccgatttaggttctttgaagggtgtagtaagtgacaacatatcaagagatcgtggg
ctaagggcattttctgagatcactggtacattgtgtatacttttcacattatccactgag
cttgctcctgttctaggactcctcatagtctctgtctccgtaatagttgctattttcaag
aggtcaactgtccccaccttcaaatcttacggaattgtccaagctcatatatcagactgc
gtgtcggaaacattttcagccatccgtactgttaggtcatttggtggtgagaagcgacaa
atttctatgtttgacaacttggcacttgcttttcaaaatagcggcacaaagctaggagtg
ctgaaagctgccaatgagtcattgactcgagtggtagtttatgtttccctaatggcgctt
tacattcttggtggaagcaaagtcagtgcgggcaagttgtctattggaaccatggcatct
tttattggttacacattcacactgacctttgccgttcaaggagctgttaataccctaggt
gatctgcgtgggacatttgcttctatagagagaataaattctgttctgtcagcaaaggac
attgatgattcacttgcatatggtttagccaaagaacttgacaataaagaaactgaagat
tctaatcctagagtgcatgaaaagggcactgttaacacacattacatgtcagcactgaaa
tcttcaagcagctgtagtgatctagcctggtctggagacattcacctggaagatgttcat
ttctcctatccactgagatctgatgtggatgtcttaaatgggcttgatcttgtaattgag
tgtggaaaagtcacagcacttgttggctctagtggtgctggaaaaagcactgtggtgcaa
cttttagcgcggtactatgagcctactcaaggccgcatcacggtggcaggggaagacatt
cgtgtatttgataaaagagaatggtctcaaattgtatccctagtgaatcaggaccctgtc
ctattctcggcatctgttggggaaaacattgcttatggtcttccggatgacgttgtctcc
aaggatgagataatcaaagctgctaaagctgccaatgctcatgaattcatcatctcactt
ccacagggctatgatactcttgttggagaacgaggtagcctcctaagtgggggacagaga
cagagaattgcaattgcccgagctcttctgaaaaatgctccttttctaatacttgatgag
gctacaagtgcactggacacaacaagtgagcggcttgtgcaggaagctctcgatctcttg
atgaagggcaggacttctttggtgatcgcccacaggttgagcaccgtgcaaaacgcgcac
caaatcgccgtctgctcagatggcaagatcatggaacttgggacacatgcggaattggtc
gccaagggaggcagttatgcatcacttgtaggcactcaaaggcttgcgtttgagtaa
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