Hordeum vulgare subsp. vulgare (domesticated barley): 123409981
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Entry
123409981 CDS
T11213
Name
(RefSeq) rRNA-processing protein FCF1 homolog
KO
K14566
U3 small nucleolar RNA-associated protein 24
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123409981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123409981
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123409981
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fcf1
PIN_9
DUF116
Motif
Other DBs
NCBI-GeneID:
123409981
NCBI-ProteinID:
XP_044958784
UniProt:
F2EB09
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Position
7H:complement(43186224..43189314)
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AA seq
203 aa
AA seq
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MGKSKSKGAKFAAVKKIISKKTIKKHKEKLLEEVLDPRKKAAEKEKLGRNVPQVSSALFF
SYNMALGPPYRVIVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKY
RVALRIAKDPRFQRLACTHKGTYADDCIVERITQHKCYIVATCDRDLKRRIRKVPGVPIM
YITQHRYSIERLPEATIGGAPRI
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtcgaagagcaagggcgccaagttcgccgccgtcaagaagatcatcagcaag
aagaccatcaagaagcacaaggagaagctgctggaggaggtgctggacccccggaagaag
gccgccgagaaggagaagctcggccggaatgtgccgcaggtgtcgtcggcgctcttcttc
agctacaacatggcgctcgggccgccctaccgggtcatcgtcgacaccaacttcatcaat
ttctccatccagaacaagttagatttggagaaaggaatgatggattgcctttatgcaaaa
tgtaccccttgcatcactgattgtgttatggctgagcttgaaaagctaggacaaaaatac
cgtgttgcgttgagaattgcgaaggaccctaggttccagagattagcgtgcacacacaag
ggaacttatgctgatgactgtattgttgagagaattactcagcacaaatgctacattgtt
gccacttgcgatagagatttaaagaggagaataagaaaggttcctggtgttccaatcatg
tatatcacccaacacaggtactcgatagaacgactccctgaagctacaattggtggagca
ccaagaatctga
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