KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123410023
Entry
123410023         CDS       T11213                                 
Name
(RefSeq) sm-like protein LSM7 isoform X1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03018  RNA degradation
hvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123410023
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123410023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hvg03019]
    123410023
   03041 Spliceosome [BR:hvg03041]
    123410023
Messenger RNA biogenesis [BR:hvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     123410023
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     123410023
Spliceosome [BR:hvg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    123410023
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 123410023
NCBI-ProteinID: XP_044958827
LinkDB
Position
7H:497786320..497788562
AA seq 120 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVYPNATRADSGICTPPVTGTLKGYDQLLNLVL
DEAIEFEREQDDPLKLSAKTRQLGLIVCRGTAVMLVSPTEGTEEIKNPFQEADGEQTTRS
NT seq 363 nt   +upstreamnt  +downstreamnt
atgtcggggcgcaaggagacggtgctggacctggccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggcaggcaagtttatcccaatgcgacgcgtgctgactctggcatt
tgtacacctccagttacaggaactttgaagggctatgaccagcttctgaacttggtgctt
gatgaagccattgagtttgaaagagagcaagatgatccattgaaactatcggcaaaaacc
agacagcttggtctcattgtctgcaggggcacagcggtgatgcttgtatcgccaaccgag
ggaacagaggagatcaaaaaccccttccaagaggctgatggggaacaaaccactcgctcg
taa

DBGET integrated database retrieval system