Hordeum vulgare subsp. vulgare (domesticated barley): 123410751
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Entry
123410751 CDS
T11213
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123410751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123410751
Membrane trafficking [BR:
hvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
123410751
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
EIF3I
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
KNTC1_N
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF12
WDR90_beta-prop_4th
RPOC_hybrid
Motif
Other DBs
NCBI-GeneID:
123410751
NCBI-ProteinID:
XP_044959628
UniProt:
F2E3M9
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All DBs
Position
7H:complement(586821042..586824881)
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AA seq
371 aa
AA seq
DB search
MAGGGGGKVACAAWIRRREDKATRVFAVHGRPSPPALEALGFDSGTCSLSEEPLARIVLG
EDPDDAPLAVAVHPAGDELVCATARGCRIFKLIFEEFTVRFIASKAPAIESVGPQKCLAF
STDGAKFAIGGEDGHLRIFHWPSMKVLLDEPNAHKSFRDMDISLDSEFLVSTSTDGTARI
WKIDEGAPLINLTRSSDEKIECCRFSRDGMKPFLFCTVAKGSKVVTVVWNISDWSRIGYK
RLLGKPVSTLSVSLDGKFLALGSHDGDFCVVDVKEMEISHWSKKVHLGSPIYGIEFCPTE
RVVISTSPQWGAELTKLNVPADWKEWQIWFILLALFLASAVLFYIFHQNSGSFWTGMPRQ
DVIDLPSHAEF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcggcggcggcgggaaggtggcgtgcgcggcgtggatccggcgccgggaggac
aaggccacgcgcgtcttcgcggtgcacggccggccctccccgccggccctggaggccctc
ggcttcgactccgggacctgctcgctctccgaggagcccctggcgaggatcgtgctcggg
gaggacccggacgacgcgccgctcgccgttgcggtgcaccccgccggcgacgagctcgtg
tgcgccacggccagggggtgcaggatatttaaactgatttttgaagagttcaccgttcgc
tttattgcaagtaaagctccagcgatcgaatctgttggaccgcagaaatgtcttgccttt
agcacagatggtgctaaatttgctatcggtggtgaggatgggcatctgagaatatttcat
tggccaagcatgaaggtgctcttagatgaacccaacgctcataaatccttcagagacatg
gatatcagcttagactcagagttcttagtttcaacatccactgatggtactgcaagaatt
tggaagatagatgagggggcaccattgatcaatttgactcgatcttcggacgagaagatt
gagtgttgccgcttttctagggatggcatgaaaccgttcctgttttgcacagttgcaaaa
ggtagcaaagttgtgactgttgtttggaacataagtgattggtctaggattggttacaaa
agactactgggaaaacctgtctccacactttcagttagcttggatgggaagtttctggct
ttaggaagccatgatggtgatttttgtgttgtggatgtaaaggagatggagatttctcac
tggagcaagaaggttcatcttggttcccctatatacggaattgaattttgtcctactgaa
agagtggtaatctccacatcgccgcagtggggagcagagctgacaaaactaaatgtgccc
gctgactggaaagaatggcaaatctggttcatactcttggcgctcttccttgcatcggct
gtcctgttctacatattccaccagaactccggttccttctggacgggaatgccccggcaa
gacgtcatcgacctaccaagccatgcagagttctga
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