Hordeum vulgare subsp. vulgare (domesticated barley): 123411028
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Entry
123411028 CDS
T11213
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123411028
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123411028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Motif
Other DBs
NCBI-GeneID:
123411028
NCBI-ProteinID:
XP_044959878
UniProt:
A0A8I6ZBG7
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Position
7H:446859901..446864063
Genome browser
AA seq
727 aa
AA seq
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MGVKNLWDILDSCKQKLPLNHLQNKKVCVDLSCWLVQFCTANRSPAFVRDKVYLKNLFHR
IRALLALNCSLIFVTDGAIPSIKLATYRRRLGSNSEADCDDTSSQPLTSLRRNKGSEFSR
MIKEAKHLGLALGIPCLDGIEEAEAQCALLDLNSLCEGCFTSDSDAFLFGARTVYRDVFI
GDGGYVICYEMEDIEKKLGFGRKSLISLALLLGCDYSNGVHGFGPEAACRLVKSAGDDSI
LDQILSDGVKATRKCKGKKAGIDKDKGGDICTKTSTSEFGMNQDSGGQFREVINAFLEPK
CHSLDSENVRRVCCQHPFRHSEFQQICEKYFEWTPEKTDEYILPKIAERELRRFSNLRST
SSALGMKPSLGEIPVPCPVLAITKQRKVHGSEYYEVSWRNMHGFQSSVVPGDLIRSACPE
KITEFLEKKDEEKKQKRKTRPKKSAQAAVKDVDARLQDLMLDIESEYATFPPASNCPETG
DVHRVVPSMDIVDLSSPSPPLRACKSQKFIGSTAAAINGIDLLSGMESQSSTQSSDVQNF
ESQSSTQSSDALNFESQSSTQSCDSRSFTLEDEVIDLSSPLPPIAERQPCRFQDLPPYDG
AERRALTDLSNFPEKSSMLGGSDNRHKAGASEGCAPFEASPPVIQGTRITSGRSNAPIIP
LALSEACAIDLSSPSPVVDRRRRDGNHGKDAIDISEAETSVVPPDDDEHERKARELRSFL
KSIRDEL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgggggtaaagaacctctgggacattctcgactcctgcaagcagaagctgccgctcaac
cacctccagaacaagaaggtgtgtgtagatctctcctgctggctcgtgcagttctgtacc
gccaaccgctcgccggccttcgtcagggacaaggtctacctcaagaacctcttccaccgc
atccgcgccctcctcgccctcaactgcagcctcatcttcgtcacagatggggcaatacct
tcaatcaagctggctacttatagacgtcggctaggatccaattctgaggctgattgtgac
gacacgagttcacaaccattgacctcccttcgtcggaacaagggatcggaattctcgcgc
atgattaaagaagcgaagcatcttggcttggccttaggcataccttgcttggatggcatc
gaggaagcagaagcacagtgtgcattgcttgatttaaactcattgtgcgaaggctgtttt
acatcagattcagatgcttttctttttggggcaaggacagtttacagagatgttttcata
ggggatggtggttatgtcatttgctacgaaatggaggacatagagaaaaagcttggtttt
ggcaggaaatcactgatatcacttgcgttgcttcttggttgtgattattctaatggagtt
catggctttggcccggaggcagcatgtcgtcttgtcaaatctgcgggagatgattccatc
ctagatcagattttatctgatggagtaaaagctacaagaaagtgtaaagggaaaaaggct
ggcattgacaaagataagggtggtgacatatgcacaaaaacaagtacctctgagtttggg
atgaaccaagattctggtggtcaattccgtgaggtaataaacgcatttctggagccaaaa
tgccattcgcttgattcggaaaatgtgcggagggtatgctgccagcacccatttcgtcat
tcagagttccaacagatatgtgagaaatattttgaatggaccccagagaagactgatgaa
tacatccttccgaagatagctgagagagaacttcgaaggttctcaaatcttcgttcgaca
tcttcagctctaggaatgaaaccttcactgggtgagattccagtaccatgccctgtattg
gcaattacgaagcaacgtaaagttcatgggagtgagtattatgaggtttcatggagaaac
atgcatggattccagtcttcagttgttccaggggatctcatccgaagtgcatgcccagaa
aaaataaccgagtttctggaaaagaaggatgaagagaagaagcaaaagaggaaaaccagg
ccaaagaaatcggcacaagctgcagttaaagatgttgatgcgcggctccaagatttgatg
cttgatattgagtctgaatacgccacgtttccgcctgcaagcaattgtcctgagacagga
gatgtgcaccgcgtggtacctagcatggatatagttgatctgtcttctccatctccaccc
ctccgggcttgcaagtcccaaaagttcatcggatcaaccgcagctgcgattaatgggatt
gatttgctgagcggtatggagtcacaaagtagcacccagtcaagcgatgttcagaacttt
gagtcacaaagtagcactcagtcaagtgatgctctgaactttgagtcacaaagtagcacc
cagtcatgtgattctcggagttttacccttgaggatgaagtgattgatctgtcctcgccc
ctgcctcctattgctgaacgtcagccatgccgcttccaagacttgccaccttatgatgga
gctgaacgaagagctctgacagatttaagcaatttccctgagaaaagcagcatgctgggc
ggttcagataacaggcacaaagctggagcaagcgaaggctgtgcgccttttgaagcatcg
ccgccagtcatccagggcactcggataaccagcggccgaagtaatgcaccgattattccg
ttggctttgtcagaagcttgcgccattgatctgtcatctccttcaccggttgtcgacagg
aggagaagggatggtaaccatggcaaggatgcaatagacattagtgaagctgagactagt
gtcgtgcctcctgatgatgatgaacatgagaggaaggcgagagagctcagatcgtttctg
aagagcattagagacgaactgtaa
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