Hordeum vulgare subsp. vulgare (domesticated barley): 123411118
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Entry
123411118 CDS
T11213
Name
(RefSeq) SNAP25 homologous protein SNAP33-like
KO
K18211
synaptosomal-associated protein 25
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123411118
Membrane trafficking [BR:
hvg04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
123411118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF5089
Motif
Other DBs
NCBI-GeneID:
123411118
NCBI-ProteinID:
XP_044959981
UniProt:
Q6X9T4
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Position
7H:complement(11997642..12000490)
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AA seq
309 aa
AA seq
DB search
MSATRPSFFPSNNNRNKPATRNPFDSDSDDDGGMARRGPARASSVPTPAAGPARASSAPI
PADEADQRGALFGAGPAPSGFASSSSAAARGRYRNDFRDSGGVEAQSVQELEGYAAYKAE
ETTRRVDGCLRVAEEMRDTASKTLLQVHQQGQQIRRTHAMAVDIDQDLSRGEKLLGDLGG
LFSKKWKPKKNGAIRGPMLTRDDSFIRKGSHMEQRHKLGLSDRPHRSNARQFLSEPTSGL
EKVEVEKAKQDDGLSDLSDILTELKGMAIDMGTEIEGQTKDLGHAEKDFDELNYRVKGAN
ARTRRLLGR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaccaggccctccttcttcccctccaacaacaacaggaacaagcccgccacc
cggaaccccttcgactccgactcggacgacgacggcggcatggcccggcgcggcccggcg
cgggcctcgtccgtcccgacccccgccgcggggccggccagggcctcctcggccccgatc
cccgccgacgaggcggaccagcggggcgccctgttcggcgcgggccccgcgccgtccggc
ttcgcgtcctcctcctccgcggccgccaggggccggtacaggaacgacttccgcgactcg
ggcggcgtggaggcgcagtccgtgcaggagctcgagggctacgcggcctacaaggccgag
gagaccacgcgccgggtcgacggctgcctccgggtcgccgaggagatgcgggacaccgcg
tcaaagaccctgctccaggtgcaccagcagggccagcagatcaggcgcacccacgccatg
gccgtcgacatcgaccaggatctctccaggggggaaaagctactaggtgatcttggtggt
ttgttttccaagaagtggaagccaaagaagaacggcgcaatcaggggccctatgctgacc
agagacgattccttcatacgcaagggcagccatatggagcagaggcataaactggggctg
tcagatcgtccgcatcgatccaatgcacgccagttcctatctgaacccacatcaggcctt
gagaaagtcgaggtggagaaggcaaagcaggatgatggcctgtctgaccttagcgacata
ctgacagagttgaaaggaatggccattgacatgggaactgagattgaggggcaaacaaag
gatcttggtcatgcggagaaggactttgacgaacttaactacagggtcaagggggcaaac
gctcgaacacgtcgcctgcttggcagatag
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