Hordeum vulgare subsp. vulgare (domesticated barley): 123411381
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Entry
123411381 CDS
T11213
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00040
Pentose and glucuronate interconversions
hvg01100
Metabolic pathways
Module
hvg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123411381
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
123411381
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
CrAss_Ring_1
DX
Motif
Other DBs
NCBI-GeneID:
123411381
NCBI-ProteinID:
XP_044960253
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Position
7H:554298850..554300645
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AA seq
419 aa
AA seq
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MAFRNVAMRVLLLMVVVSAAYAKGKEEKKESADGPAASGPAASGPGGEYDITKLGAKPDG
KTDSTKAVEEAWASACGGTGKQTIVIPKGDFLTGALNFTGPCKGDSVTIKLEGNLLASND
LSKFPSNWIEIMRIKNLVITGKGSIDGQGKAVWTKNSCQKNYNCKILPNSLVLDFCDDAL
IEGISIINSKFFHMNIYECKGVTVKDVKVSAPGDSPNTDGIHMGDSSNVNIIDTTIAVGD
DCISIGPGSKQVNISGVTCGPGHGISIGSLGRYKDEKDVTDIHVKNCVFKGSTNGLRIKS
YEDSKSPLVASKISYENIKMDDSGYPIIIDQKYCPNKLCTAKGDSSRVTVKDVTFKNITG
TSSTPEAVSLLCSDKKPCEGVTMSDVKIEYSGKNNKTMAVCTNVKVTATGVDKANACAA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaggaacgttgcgatgagagtcctgttgctcatggtggtggtgagcgcagcg
tacgccaaaggcaaggaggagaagaaggagagcgcagatggtccggcggcttccggtccg
gcggcttccggtccgggcggggagtacgacatcaccaagctcggcgcgaaacccgacggc
aagacggacagcaccaaggcggtggaggaggcatgggcttcggcgtgcggcggcacaggc
aagcagacgatcgtcatccccaagggtgatttcctgactggagctctaaatttcacgggg
ccatgcaagggcgacagcgtcaccatcaagctggaaggcaacttgcttgcttccaacgac
ctgtccaagttcccgtctaactggatcgagatcatgcgcatcaagaacctcgtcatcacc
ggcaaaggatcgatcgacggtcaaggcaaggccgtctggaccaagaacagttgccaaaag
aactacaactgcaagatcttgccaaactccttggtgctggacttctgtgatgacgcgctc
atcgaaggcatctctatcatcaattccaagttcttccacatgaacatctacgagtgcaag
ggcgtgaccgtcaaggacgtgaaggtgagcgcgcccggggacagccccaacaccgacggc
atccacatgggcgactcgtccaatgtcaacatcatcgacaccaccatcgccgttggcgac
gattgcatctccatcggccccggctccaaacaagtcaacatcagcggcgtgacctgcggc
ccaggccacggcatcagtattggcagcctcgggaggtacaaggacgagaaggacgtgacc
gacatccacgtcaagaactgcgtgttcaagggatccaccaacggcctccgcatcaagtcg
tacgaggactccaagtcccccctcgtcgcgtccaagatcagctacgagaacatcaagatg
gacgactcgggctaccccatcatcatcgatcagaagtactgccccaacaaactctgcacc
gccaagggcgactcctccagggtcaccgtcaaggacgttaccttcaaaaacatcaccggc
acctcctccacccctgaggccgtcagcctgctctgctccgacaaaaagccctgcgaaggc
gtcacaatgtccgacgtcaagatcgagtactccggcaagaacaacaagaccatggctgtc
tgcaccaacgtcaaagtcaccgccacgggggtcgacaaggccaacgcatgcgccgcctga
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