Hordeum vulgare subsp. vulgare (domesticated barley): 123411805
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Entry
123411805 CDS
T11213
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00040
Pentose and glucuronate interconversions
hvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123411805
Enzymes [BR:
hvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123411805
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123411805
NCBI-ProteinID:
XP_044960701
UniProt:
F2EHZ3
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All DBs
Position
7H:complement(500193235..500195234)
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AA seq
444 aa
AA seq
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MEGFQWSRPVSLLLYAVLFLSAAAVSEANIGEFDEHWQRRKLEARARAEATYHPNPIEVA
NSLNRAVHRSLRDESGSRRKLLGLHKKFAGPCTATNPIDRCWRCRKDWATDRMRLARCAQ
GFGRNATGGLGGKIYIVTDGTDDDVLEPRPGTLRWGVIQNEPLWIIFARPMLIKLKEELL
VGSDKTIDGRGAQVRIADGAQVTVQYSHNVIIHNIHVNDLIVGKGGRIRDSPQHAGFRTQ
SDGDGVSVFGSTNVWLDHLSLATCQDGLIDVIAEATGVTISNCHLTNHNDVMLFGSSDSN
PKDQIMQVTVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTIISQGNR
YIAPPNLAAKLITKRLGASEAEWKNWVWHSQDDLLLNDAVFADSGGANERKFDKDDLITP
KPGSYVTRLTRFAGCLPCKPGKPC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggggttccagtggagcaggcccgtctccttgctcctgtacgccgtcttgttcctg
tcggcggcggccgtgtcggaggccaacatcggcgagttcgacgagcactggcagcggcgc
aagctggaggccagagcccgcgctgaggccacctaccaccccaaccccatcgaggtcgcc
aacagcttgaaccgcgccgtccacagatcccttagggacgagagcggctcgaggaggaag
ttgctgggactgcacaagaagttcgccgggccgtgcacggcgacgaacccgatcgaccgg
tgctggcggtgccgcaaggactgggcgacggaccggatgcgtctggcgcggtgcgcgcag
gggttcgggaggaacgccacgggcgggctgggcgggaagatctacatcgtcacggacggc
accgacgacgacgtgctggagccgcggccgggcacgctccggtggggcgtgatccagaac
gagcccctgtggatcatcttcgccaggcccatgctgatcaagctcaaggaggagctgctg
gtaggcagcgacaagaccatcgacgggcgcggagcgcaggtgcgcatcgccgacggcgcg
caggtcaccgtgcagtactcgcacaacgtgatcatccacaacatccacgtcaacgacctc
atcgtgggcaagggcggcaggatccgggactcgccgcagcatgccgggttccgcacccag
tccgacggcgacggagtgagcgtcttcggctccaccaacgtctggctcgaccacctctcc
cttgccacctgccaggacggcctcatcgacgtcatcgccgaggccaccggcgtcaccatc
tccaactgccacctcaccaaccacaacgacgtcatgctcttcggctccagcgacagcaac
cccaaggaccagatcatgcaggtcaccgtcgccttcaaccacttcgggagaggcctcgtg
cagagaatgccaaggtgccgatggggattcttccacgtggtgaacaacgactacacccac
tggctcatgtacgccatcggcggcagcaagaacccgaccatcatcagccaggggaaccgc
tacattgcgccgccgaacctggcggcgaagctgatcacgaagcggctgggcgcgtcggag
gcggagtggaagaactgggtgtggcactcgcaggacgacctgctgctgaacgacgccgtc
ttcgccgacagcggcggtgccaacgagaggaagttcgacaaggatgacctcatcacgccc
aagccgggatcatacgtcaccaggctcacgcgcttcgccggctgcttgccttgcaagccc
ggcaagccctgctaa
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