Hordeum vulgare subsp. vulgare (domesticated barley): 123412614
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Entry
123412614 CDS
T11213
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123412614
04121 Ubiquitin system [BR:
hvg04121
]
123412614
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123412614
Membrane trafficking [BR:
hvg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123412614
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123412614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
Rad50_zn_hook
zf-C3HC4_3
zf-RING_5
Zn_ribbon_6
Zn_ribbon_NOB1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
123412614
NCBI-ProteinID:
XP_044961499
UniProt:
A0A8I6Y584
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All DBs
Position
7H:complement(76201178..76202439)
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AA seq
317 aa
AA seq
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MSEPGARPRQRRRWRVYWCYVCSRALRTVSSPTSDVFCPRCLGRFLHEIELPVPREPVHR
PTERLFHPAPLFPYEGAPRHWVIYRGEDDNAADTDTPGPRRRRVPSPPPAPGTHGGIDGA
EAGPQATGIDPAGFFTGPNLNALIEGLTQNDRPGPPPAPASAIDSLPMVQVSPAHMADGS
QCPVCKEEFELGETARELPCKHAYHSDCIVPWLELHNSCPVCRQELPLPAGEFPDGAAAG
DGGDERVPPWQQLAGWGPLAWLLMLGDPEVNGWENGPGRRGREADADDGGGNVSRRATIL
QSFVLVAACFFFVSFLV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcccggcgcccgtccgcggcagcggcggaggtggcgcgtgtactggtgctac
gtgtgtagccgcgcgctgcgcaccgtgtcgtccccaacctccgacgtcttctgcccccgc
tgcctcggccgcttcctccacgagatcgagctccccgtgccgcgcgagcccgtgcaccgg
cccaccgagcggctcttccacccggcgcccctgttcccgtacgagggcgctccccgccat
tgggtcatatacaggggcgaggacgacaacgcggccgacaccgacacgccaggcccacgt
cgccgccgtgtcccctccccgcctccggcgccgggaacgcacggcggcatagacggtgcc
gaagccggtccacaggcaaccggcatcgacccggcggggttcttcaccggccccaacctg
aacgcgctcatcgagggtctgacgcagaacgaccgccccggcccgccgcccgcgccggca
tcggcgatcgactcgctcccgatggtgcaggtctcgccggcgcacatggcggacggctcg
cagtgccccgtctgcaaggaggagttcgagctcggggagaccgctcgcgagctgccttgc
aagcacgcgtaccactccgactgcatcgtgccgtggctcgagctccacaactcctgtccg
gtctgccggcaggagctgccgctaccagccggtgaatttcccgatggtgctgctgcaggc
gacggaggcgatgagagggttccgccgtggcagcagcttgccggctggggaccactggct
tggctgttaatgctgggggatccggaggtgaacggctgggagaatggacctgggaggcgt
gggagggaagccgacgccgatgacggcggcggcaatgtcagtcgtcgcgccacgattctt
cagtcgtttgttctcgtcgctgcttgctttttctttgtctcatttctcgtttga
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