Hordeum vulgare subsp. vulgare (domesticated barley): 123412665
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Entry
123412665 CDS
T11213
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123412665
Enzymes [BR:
hvg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
123412665
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
123412665
Prokaryotic type
123412665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
DUF3879
Motif
Other DBs
NCBI-GeneID:
123412665
NCBI-ProteinID:
XP_044961547
UniProt:
A0A8I6YNG9
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Position
7H:218571053..218575681
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AA seq
507 aa
AA seq
DB search
MAPTASPSPGPVVTAPVHQARVRVLHPGQGLPPAGAKPGPVVYWMLRDQRLADNWALLHA
ASLAAASAAPLAVAFSLFPKPFLLSARRRQLGFLLRGLRRLAADAATRRIPFFLLTGGPT
EIPALVWRLGASALVADFSPLRPVREALDAVVGTLGRDAASVAVHQVDAHNVVPVWAASG
KLEYSAKTFRSKMNKVLDEYLVEFPELAQVVPWDREQPKDIDWDMLIDTVCSQAEDVPEI
DWCEPGEAAAMEALLGTKDGFLTKRIKSYDSDRNYPTKPTALSGLSPYLHFGHISAQRCA
LEAKKRRHLSPKSVDAFLEELIIRRELADNFCYYQPHYDSVAGAWEWARKTLKDHAADKR
EHIYTREQLENAKTADPLWNASQLEMVHHGKMHGFMRMYWAKKILEWTSGPEEALSIAIY
LNDKYHIDGRDPNGYVGCMWSICGLHDQGWKERPVFGKIRYMNYAGCKRKLDVDAYISYV
KRLVAQRKKRKLEESLNSAAKYSKSED
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccgcaagccctagcccaggcccggtggtcaccgcaccggtccaccaagct
cgcgtgcgggtgctccacccggggcagggcctgccccctgctggcgcgaagcctggcccg
gtggtctactggatgctgcgagaccagcggctagccgacaactgggcgctcctccacgcg
gcgagcctcgccgccgcttccgcggcgccgctcgccgtcgcgttctccctgttcccgaag
ccgttcctcctctccgcgcgccgccggcaactcggattcctcctccgtggcctccgccgg
ctcgccgccgacgctgccacccgccgcatccccttcttcctccttaccggtgggcccact
gagataccagcgctggtgtggcggctcggggcgtcggcgctggtcgccgacttctcaccg
ctccggccggttcgcgaggcgctggacgcagtggtcggcacgctggggcgggatgctgcc
agtgtggctgttcaccaggtagacgcgcacaacgtggtgccggtatgggcggcatcgggg
aagctggagtactctgccaagaccttcagaagcaagatgaacaaggtcttggacgagtac
ctggtcgagttccccgagttagcacaggtggtgccatgggacagggagcagccaaaggac
attgattgggatatgctgattgacacggtttgcagccaggcagaggacgtgcctgagatt
gactggtgtgagccgggcgaggcggcggcaatggaggcacttctgggtaccaaggatggg
ttcctaacgaaaaggattaagagctatgattcggaccggaattatcccacaaagccaacg
gcattgtctggcctctctccctacctgcattttgggcatatttcagcacaaagatgtgct
ctcgaggcaaaaaagcgtcgccatcttagtcccaagtcagtggatgctttcttggaggag
ctgataataaggagggagctagccgacaatttctgctactatcagcctcactatgattcg
gtagcaggtgcttgggagtgggcgaggaagacactgaaggatcatgctgccgacaaaaga
gaacacatttacacgagggagcagcttgagaatgcaaaaacagctgatcctctctggaat
gcatcacagttggagatggtccaccatggaaaaatgcatggattcatgcgaatgtattgg
gccaaaaaaattctagaatggaccagtggacctgaagaagcactttcaatagcaatatat
ttgaatgacaagtatcacatagacggcagggaccccaatggctatgttggttgcatgtgg
tctatatgtggcctccatgatcagggttggaaggagcgtccggtatttggaaagatacgt
tacatgaattatgctggttgcaagagaaaattagacgttgatgcctacatttcttacgtc
aaaagattggttgctcaacgcaagaaaaggaaattggaggaatctctgaattcagcagcc
aagtactcaaagtctgaggactag
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