Hordeum vulgare subsp. vulgare (domesticated barley): 123412763
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Entry
123412763 CDS
T11213
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1-like
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00196
Photosynthesis - antenna proteins
hvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
123412763
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
hvg00194
]
123412763
Photosynthesis proteins [BR:
hvg00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
123412763
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GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
123412763
NCBI-ProteinID:
XP_044961634
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Position
7H:104538825..104539797
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AA seq
266 aa
AA seq
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MAATTMSLSSSAFAGKAVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLG
PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG
PLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
ENLADHIADPVNNNAWAFATNFVPGK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccactatgtccctctcctcctcagcctttgccggcaaggcagtgaagaat
atggcattgtctgctctctttggcgaggcacgtgtcactatgcggaagactgcggcaaag
gcaaaacaagttgcttctagcagcccatggtacggtgctgatcgtgtgctctacctcggt
ccgctatcaggtgagccaccgagctacttgaccggcgagttccctggtgactatgggtgg
gatactgccgggctctcagctgaccctgagaccttcgccaagaaccgtgagctggaggtg
atccactgtcgatgggctatgcttggtgcgcttggttgtgtcttccccgagttgctcgcc
cgcaatggcgtcaagtttggtgaggctgtttggttcaaggccggctcccaaatcttcagc
gaaggcggccttgactatctcggcaaccccagcctcgtccacgcgcaaagcatcctagcc
atttgggcttgccaagttgtgctcatgggcgccgtcgaggggtaccgcattgctggtggc
ccacttggcgagattgttgacccactttaccctggaggcagctttgacccacttggctta
gccgaggaccccgaggcattcgctgagcttaaggtgaaggagatcaagaacggtcgtctt
gctatgttctccatgttcggctttttcgttcaagccattgtcaccggcaagggcccactc
gagaatcttgctgaccatattgccgatccagtcaacaacaatgcatgggcattcgccact
aacttcgtgcccggcaagtaa
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