KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123413175
Entry
123413175         CDS       T11213                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03083  Polycomb repressive complex
hvg04120  Ubiquitin mediated proteolysis
hvg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123413175
   04120 Ubiquitin mediated proteolysis
    123413175
  09126 Chromosome
   03083 Polycomb repressive complex
    123413175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hvg04131]
    123413175
   04121 Ubiquitin system [BR:hvg04121]
    123413175
   03036 Chromosome and associated proteins [BR:hvg03036]
    123413175
Membrane trafficking [BR:hvg04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    123413175
Ubiquitin system [BR:hvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     123413175
   Cul7 complex
     123413175
Chromosome and associated proteins [BR:hvg03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     123413175
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     123413175
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB DarP
Other DBs
NCBI-GeneID: 123413175
NCBI-ProteinID: XP_044962060
UniProt: A0A8I7BJV5
LinkDB
Position
7H:complement(586440849..586441382)
AA seq 177 aa
MAAVEGEKKITLKSSDGEEFDVDKTVAMESQTLRHMIEDECTDNAIPLPNVTSKILSKVI
EYCNQHVQARPKPADSAVADAATNSSTSAPAAAPAPTVDMKSWDAELIKVDQATLYDLIL
AANYLDIKGLLDLTCQTVADMIKGKTPEEIRKTFNIENDYTPEEEAEIRKENQWAFE
NT seq 534 nt   +upstreamnt  +downstreamnt
atggcggccgtggagggcgagaagaagatcacgctcaagagctcggacggcgaggagttc
gacgtggacaagacagtcgccatggagtcgcagaccctccgccacatgatcgaggacgag
tgcaccgacaacgccatcccgctccccaacgtcacctcgaagatcctctccaaggtcatc
gaatactgcaatcagcacgtgcaggccagaccaaagccggccgactccgctgtcgccgac
gccgccaccaactcctccacctctgccccagccgcggcgccagcccccaccgtggacatg
aagagctgggacgccgagctcatcaaggtcgaccaggccaccctctacgaccttatcttg
gctgcaaattatcttgacatcaagggactactggacctcacttgccagactgtcgccgac
atgatcaagggcaagactcccgaggagatacgcaagaccttcaacatcgagaatgactac
acaccggaggaggaggccgagattcgcaaggagaaccagtgggcttttgagtag

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