Hordeum vulgare subsp. vulgare (domesticated barley): 123413281
Help
Entry
123413281 CDS
T11213
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123413281
04121 Ubiquitin system [BR:
hvg04121
]
123413281
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
123413281
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
123413281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
R3H
Motif
Other DBs
NCBI-GeneID:
123413281
NCBI-ProteinID:
XP_044962157
UniProt:
A0A8I6ZFF0
LinkDB
All DBs
Position
7H:615541592..615546337
Genome browser
AA seq
1104 aa
AA seq
DB search
MQPPTGQRRGPAAPSSRGVWRPRSAAEATAPTPAAYAPPLLPLPNHNPSPGPASDTRAPR
RRQRRPNRNNGPAPSGPANAPAPRRQERSGPANASAPRRQERANAPAAGGGSVPQLVQEI
QDKLARGAVECMICYDMVRRSAPVWSCGSCFSIFHLPCIRKWARSPASVSDASAPASDAW
RCPGCQSVQDVRARDIAYTCFCRRRRDPPNDLFLTPHSCGEPCSKPLHRADPAAAAKGDD
DDVSARCPHVCVLQCHPGPCPPCKAFAPERPCPCGKQSITRRCADRSTPVTCGQRCEKLL
PCGRHRCEKVCHTGPCGDCEVNFPARCFCGKKTDTLLCGEMALKGKLSDKDGVFSCSEVC
GHSLACGNHVCQDVCHPGPCGECELVPVKVITCHCGKTRLQEKRASCLDPIPTCDKVCDK
RLPCGVHRCKVTCHEGECPPCLVRVEQRCRCGSSGQMVECYRASKEEFRCNKPCGRKKNC
GRHRCSECCCPLSKPFAQHQGDSMDPHFCQIPCGKKLRCGQHGCQHLCHSGHCDPCRETI
FHDLTCACGRTSIPPPQPCGTPTPSCPHQCMVPQPCGHPASHQCHFGDCPPCVVPVTREC
VGGHVMLRNIPCGSKDIRCNQPCGKNRQCGLHACARPCHPAPCDPPPANGEASSSSGGKV
SCGQLCGVPRRECKHTCNAPCHPSSPCPDVRCEHRVTITCSCGRITTTVPCSAGGAYNGD
SAFDISVMQQLPIPLQPVESNGKRVPLGQRKLCCDEECAKMERKRVLAEAFDITPPNLDA
LHFGENSNASDLLSDLFRREPKWVLAIEERCKFLVLGKTKGNSSSNIKFHVFCHMMKDKR
DAIRLIADRWKLSVQAVGWEPKRFITVHVTPKSKVPARVLGSKPGVPVSASHPYFDPMVD
MDPRLVVAMLDLPRDADVSSLVLRFGGECELVWLNDKNAVAVFSDPARAATALRRLDYGS
AYQGAAIFCPSSITQASVSSNVWVGAQRYGGLAAKSSANSWKASLSEPDPSGDWTVLSHA
SGSVWKRGDTAAQVMGSSNRWNALESDAATSSGPTDKRKPTLRTETGSSSSAPGAGSSAA
PSAGQSVSKLQPDVEVEDWEESCE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccccaccggtcaacgccgcggccccgccgcgccttcctcccgcggcgtatgg
cgcccccgatccgcagccgaggccaccgcccccacccccgccgcatatgcgcccccgctc
ctccccctccccaaccacaaccccagccccggccctgcctcggacacccgcgcgccccgc
cgccgccagcgccgcccgaaccgcaacaacggccccgccccgtccgggcccgctaacgcc
cccgcgccgcggcggcaagagaggtccgggcccgccaacgcgtccgcgccgcggcggcag
gagagggcgaacgccccggcggcggggggcgggtcggtgccgcagctggtgcaggagatc
caggacaagctggcgcggggggcggtggagtgcatgatctgctacgacatggtgcgccgc
tccgcccccgtctggtcctgcggcagctgcttctccatcttccacctcccctgcatccgc
aagtgggcgcgctccccggcctccgtctccgacgcctccgccccggcctccgacgcctgg
cgctgccccggctgccagtccgtgcaggacgtccgcgcccgcgacatcgcctacacctgc
ttctgccgccgccgacgcgacccgcccaacgacctcttcctcaccccgcactcctgcggc
gagccctgctccaagccgctccacagagcagaccctgctgccgccgccaagggagacgat
gatgatgtctccgccaggtgcccgcacgtctgcgtcctgcagtgccaccctgggccctgc
ccgccttgcaaggcgttcgctccggagcgcccctgtccttgcggcaagcagtctatcacc
cgtcgctgcgcggaccggagcacgcctgtcacgtgtggccagcggtgcgagaagctgctg
ccctgcgggaggcaccgttgcgagaaggtctgccacaccggcccctgcggtgactgcgag
gtgaacttccccgcacggtgcttctgtggcaagaagacagatacattgttgtgcggcgag
atggcactgaaagggaagctgtcggacaaggatggggtgttctcttgcagtgaggtttgt
ggccacagtctggcatgtggcaatcatgtctgccaggatgtttgccacccagggccgtgc
ggggagtgcgagcttgtgccagtgaaggtcatcacatgccattgtggcaagacgaggctg
caggagaagagggctagctgcttggacccaatccccacctgtgacaaggtatgcgacaag
agattgccgtgtggagtgcataggtgcaaggtcacctgccacgaaggagagtgtccaccc
tgcttggtgcgtgtcgagcagaggtgtcgctgtggttcatcaggccagatggtggagtgc
tacagggcatcgaaggaagagttccgttgcaacaagccttgtggccgcaagaagaactgt
gggaggcacaggtgcagtgagtgctgttgcccgctgtcgaagccatttgctcagcatcaa
ggtgacagcatggatccccatttctgccagataccatgtggcaagaagctccggtgtgga
cagcatggatgccagcatctctgccacagcggtcactgcgacccttgccgtgagaccatt
ttccatgatctcacttgtgcctgtggcaggacatctattccgccaccgcagccatgtggt
acaccaactccatcatgcccacaccagtgcatggtccctcagccttgcgggcatccagct
tcacatcaatgccattttggggactgcccaccttgcgttgtgccagtaacaagagaatgt
gttgggggtcatgtgatgttaaggaacatcccttgtggttcaaaggatatcagatgcaac
cagccatgtggaaagaaccgtcaatgtggactgcatgcttgtgccaggccttgccatcct
gccccatgtgatccgccgcctgcaaatggagaagctagttcaagctctgggggcaaagtt
tcatgtggacagttgtgtggtgtcccaaggagggaatgcaagcatacttgcaatgctcca
tgccacccatcgtcaccttgcccagacgtgagatgtgaacaccgtgtgactataacttgt
tcttgtggccgtattactacaactgtgccctgcagtgctggtggagcctacaatggtgat
agtgcgttcgatatctctgtcatgcagcagctgccaatccctctccaaccagtggaatca
aatgggaagagggttcctcttgggcagagaaaactctgttgtgatgaggagtgcgcaaaa
atggagaggaaaagggtccttgctgaagcttttgacattaccccacccaatcttgatgca
ctgcattttggtgagaactcaaatgcgtcggatttgctttctgatcttttccggcgtgag
ccaaagtgggtgctggccatagaggagaggtgcaagttccttgtccttgggaagacaaag
gggaattcttcaagcaacatcaagttccatgtcttctgtcacatgatgaaggataagaga
gatgctatcaggctcattgcagataggtggaagctttctgtccaggcagttggttgggaa
cccaagcgctttattactgtccatgtcacacccaagtctaaggtgcctgctcgtgtactg
ggctctaagcccggtgtccctgtctcggcgtcccatccttactttgatcccatggtggac
atggatccgaggctcgtcgttgcaatgctggacctgccaagggatgctgatgttagctct
ctagttttaaggtttggtggggagtgtgaattggtttggctgaatgacaagaatgcagtt
gcagtgttcagcgatccagctagagcagcaacagcgctgaggcggctggattatgggtct
gcttaccagggtgctgcaatcttttgcccaagcagcatcactcaggcttccgtgtcaagc
aatgtctgggttggagcacagagatatggagggttggctgcaaagagcagtgccaattca
tggaaggcctctctctctgagcccgacccatctggagactggacagtactcagtcatgct
tcagggtcggtgtggaaacgtggtgatacggctgctcaggtcatgggttcttcaaaccgc
tggaatgccctggagtctgatgctgcaaccagctctgggccaaccgacaaacgtaagcct
actcttcgcactgaaacaggatccagcagttctgcccctggcgctggatccagcgcagca
ccaagtgctgggcaatcagtgagcaagctgcagcctgacgtcgaagttgaggactgggaa
gaatcatgtgaatga
DBGET
integrated database retrieval system
