Hordeum vulgare subsp. vulgare (domesticated barley): 123413304
Help
Entry
123413304 CDS
T11213
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123413304
03036 Chromosome and associated proteins [BR:
hvg03036
]
123413304
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123413304
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123413304
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123413304
microRNA pathway
RISC loading complex
123413304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
123413304
NCBI-ProteinID:
XP_044962181
UniProt:
A0A8I6ZC03
LinkDB
All DBs
Position
7H:complement(493144388..493159178)
Genome browser
AA seq
955 aa
AA seq
DB search
MLEVLEMTPPPPPPPQPRRQPRGGGGGRKQPLQSSVAQPKAEPPTTPEGGGKRCGGKRRG
GRGRARPAEGPRPATGPPVPAAAATNRAVIGPPVPGKGLSFCRRPGFGTVGARCVVKANH
FLAEIPDKDLTQYDVKITPEVTSRCVNRAIIAELVRLYRESDLGMRLPAYDGRKSLYTAG
ALPFDAREFVVRLTDDDSGTGVPPREREYRVAIKFAARADLHHLRQFIAGRQADAPQEAV
QVLDIVLRELASQRYVAIGRSFYSPDIRKPQRLGDGLQSWCGFYQSLRPTQMGLSLNIDM
SSTAFIEALPVIDFVAQILGKDVMSRPLSDANRIKIKKALRGVKVEVTHRENVRRKYRIS
GVTAQPTHELIFPIDDQMNMKSVVEYFKEMYGFTIQQSHLPCLMVGNQKKANYLPMEACK
IVEGQRYTKRLNEKQITSLLKVTCQRPREKEMDILQTVHQNGYDQDPYAKEFGINISEKL
TSVEARVLPAPWLKYHDAGKEKECLPQVGQWNMVNKKVINGGKVSHWACINFSRSVQETT
ARGFCQELAQMCQISGMEFNSEPVLPIYSARPDQVAKALKHVYNVALHKLKGKELELLLA
ILPDNNGALYGDIKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLV
DALSWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHR
QELIQDLYKTWHDPQRGTVTGGMVRELLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLY
ELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSMDKSGNILPGTVVDSKI
CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTNNLCYTYARCTRSVSVV
PPAYYAHLAAFRARFYMEPELSENHTSKSSSGTNGTSVKPLPAVKEKVKRVMFYC
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggtcctcgagatgacgccgcctccgccgccgccgccgcagccacggcgccag
cctaggggaggcggcggggggaggaagcagccgctgcagagcagcgtcgcgcagcccaag
gcggagccgccgacgacgcccgagggaggaggcaagaggtgcggcgggaagcggcgcggc
ggccgcggccgcgccaggcccgcggaggggccgcggccggcgacagggcctcccgtgccg
gccgcggcggcgacgaaccgcgccgtcattggcccgcccgtgcccggcaaggggctctcc
ttctgccggcggccggggttcgggaccgtgggcgcgcgctgcgtcgtcaaggccaaccac
ttcctcgccgagattcccgacaaggacctcacccagtacgacgtcaagatcacgccggag
gtcacctcccggtgcgtgaaccgggccatcatcgccgagctggtgcgcctctaccgggag
tccgacctcggcatgcgcctcccggcctacgacggccgcaagagcctctacaccgccggc
gcactcccgttcgacgcgcgcgagttcgtcgtgcgcctcaccgacgacgacagcggcacc
ggcgtcccaccacgcgagagggagtacagggtcgccatcaagttcgccgcgcgcgccgac
ctccaccacctccggcagttcatcgccgggcggcaggccgacgcgccgcaggaggcagtc
caggtcctcgacatcgtcctccgggagctcgccagccagaggtacgtggcgatagggcgg
tcgttctactcgccggacataaggaagccgcagcggctcggcgacggcctgcagtcgtgg
tgcgggttctaccagagcctccggccgacacagatgggcctgtcgctcaacatcgatatg
tcgtccaccgcgttcatcgaggcgctgccggtgatcgacttcgtggcccagatattgggg
aaggatgtcatgtcaaggccattgtcggatgcaaacaggatcaagatcaagaaagcgctg
cgtggggtgaaagttgaagttactcaccgggaaaatgtaaggcggaagtaccgcatttcg
ggggtgactgcgcaaccaactcatgaactcatcttcccaattgacgatcaaatgaatatg
aagtctgtcgtggaatatttcaaggaaatgtatgggtttaccattcagcaatcacatctt
ccttgccttatggttggaaaccaaaagaaggcaaactatctaccgatggaggcctgcaag
attgttgagggtcagagatacacaaagaggttgaatgaaaagcagatcacatcactgcta
aaggttacatgccaaaggcctagagaaaaggaaatggatattctacagacagttcatcaa
aacggatatgaccaagatccttacgcaaaggaatttgggatcaacataagtgagaagcta
acatccgttgaagcgcgcgtccttcctgcaccttggctgaaatatcatgatgctggaaag
gaaaaggagtgcctgccacaggttggtcaatggaacatggtgaacaagaaagtgattaat
gggggcaaagtaagtcactgggcttgtataaacttctcaaggagtgttcaagaaaccacc
gcacgcggattctgccaagagttggcacaaatgtgtcaaatttcgggcatggaattcaac
agtgaaccggtgcttccaatatattcagctagaccagatcaagtagcgaaggcactaaag
catgtctataatgtagcactacacaaactcaagggtaaagaacttgagcttcttttggcc
atcctcccagacaataatggagctttatatggtgacatcaaacgtatctgcgaaaccgat
ttgggcttgatatcgcagtgttgcttaacgaaacatgtttttaagatcagcaagcagtat
ttggcaaatgtctcgcttaaaatcaatgttaagatgggaggaaggaacaccgtgctcgtg
gatgcgctaagttggaggattcccttggtcagtgacataccaactattatatttggggca
gatgtaacacatcctgaaactggggaggactctagtccatccattgctgcagttgtggct
tctcaagactggccggaagttacaaaatatgctggattggtgtgtgcacaggcacatcga
caagagctcattcaggacctttacaaaacatggcatgaccctcagagaggcacagtaaca
ggaggcatggtcagggaactcttaatatcctttaggaaggccacgggacagaaaccattg
aggataattttctaccgggatggcgttagtgaaggccaattctaccaagttctcctttat
gagttggatgctatccgtaaggcttgtgcatccctagaaccaaattaccaacctcctgta
acgtttgtcgtcgttcaaaagcgtcaccatacaagactgtttgcaaacaatcacaaagac
agaagtagcatggacaaaagtggaaacattttacctggaactgttgttgattcgaagata
tgccacccaacggagtttgatttctacctctgtagtcacgctggaatccagggtacaagt
aggccagctcactaccatgtcctctgggatgagaacaacttctcagcagacgaaatgcag
acgttgacaaacaacctttgctacacttacgcacggtgcacgcgctctgtttccgtcgtc
ccacctgcatattacgcgcatctggctgcattccgggcgcggttctacatggagccggag
ctgtcggagaaccacacgtcgaagagctccagtgggacgaatggtacctccgtgaagcct
ttgcccgctgtgaaagagaaggtgaagagggtgatgttctactgttga
DBGET
integrated database retrieval system
