Hordeum vulgare subsp. vulgare (domesticated barley): 123413346
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Entry
123413346 CDS
T11213
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123413346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hvg02000
]
123413346
04147 Exosome [BR:
hvg04147
]
123413346
04090 CD molecules [BR:
hvg04090
]
123413346
Enzymes [BR:
hvg01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123413346
Transporters [BR:
hvg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123413346
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123413346
CD molecules [BR:
hvg04090
]
Proteins
123413346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
RsgA_GTPase
AAA_5
nSTAND1
Zeta_toxin
AAA_25
AAA_30
DUF815
DUF6264
Rad17
DUF87
Motif
Other DBs
NCBI-GeneID:
123413346
NCBI-ProteinID:
XP_044962225
UniProt:
A0A8I6YF77
LinkDB
All DBs
Position
7H:293389625..293395302
Genome browser
AA seq
1371 aa
AA seq
DB search
MSSDPEEIKARVVVHGADAEADAADEWARPELEAFHLPSTSQPPHLFHPPHPDPEAEQST
PAPAVAAGATNNASSSPPPPRSPPPAPMETEKLPPNAKPYAGEKPPPPAPAAALRDLFRF
ADGLDRVLMAVGTLGALVHGCSLPVFLRFFADLVDSFGSHADDPDTMVRLVVKYAFYFLV
VGAAIWASSWAEISCWMWTGERQSTRMRIRYLQAALKQDVSFFDTDVRTSDVIYAINADA
VIVQDAISEKLGNLIHYMATFVAGFVVGFTAAWQLALVTLAVVPLIAVIGGLTAATMGKL
SSKSQDALSSASNIAEQALSQIRIVQSFVGEERVAQAYSSALAVAQRIGYRNGFAKGLGL
GGTYFTVFCCYALLLWYGGHLVRGHHTNGGLAIATMFSVMIGGLALGQSAPSMAAFAKAR
VAAAKIFRIIDHTPGITKEGDAGVELESVTGRLQLRNVEFAYPSRPDTPILRRFSLSVPA
GKTVALVGSSGSGKSTVVSLIERFYDPSSGQIMLDGVELKDLKLRWLRSQIGLVSQEPAL
FATSIRENLLLGREEASQVEMEEAARVANAHSFIIKLPDGYDTQVGERGLQLSGGQKQRI
AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVA
VLQAGAVSEMGAHDDLMARGDSGAYAKLIRMQEQAHEAALVSARRSSARPSSARNSVSSP
IMMRNSSYGRSPYSRRLSDFSTADFSLSVIHDPAAHRMGMGMEKLAFRAQASSFWRLAKM
NSPEWGYAVAGSLGSMVCGSFSAIFAYILSAVLSIYYTPDPRHMDREIAKYCYLLIGMSS
AALLFNTVQHLFWDTVGENLTKRVREKMLTAVLRNEMAWFDMEANASAHIAARLALDAQN
VRSAIGDRISVIVQNSALMLVACTAGFVLQWRLALVLLAVFPLVVGATVLQKMFMKGFSG
DLEGAHAKATQIAGEAVANVRTVAAFNSEDKITRLFEANLHRPLRRCFWKGQIAGIGYGV
AQFLLYASYALGLWYAAWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRA
MHSVFETIDRKTEIEPDDVDTAAVPERPRGDVELKHVDFSYPSRPDIQVFRDLSLRARAG
RTLALVGPSGCGKSSVLALIQRFYEPSSGRVLLDGKDIRKYNLKALRRVVAMVPQEPFLF
AGTIHDNIAYGREGATEAEVVEAATQANAHKFVSALPEGYKTCVGERGVQLSGGQRQRIA
IARALVKQAAIMLLDEATSALDAESERCVQEALDRAGSGRTTIIVVAHRLATVRNAHTIA
VIDDGKVVEQGSHSHLLNHHPDGCYARMLQLQRLTPHTVAMPVPGPSASNV
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgaccctgaagagatcaaggctcgcgtcgtcgtccacggcgccgacgccgag
gccgacgccgccgacgagtgggctcgcccggagctcgaggctttccacctcccctccacc
tcccagcccccacacttgttccacccaccgcacccagacccagaagcagagcaatccaca
ccagcgccggccgtggcagcaggtgccaccaacaatgcgtccagctctccccctccccct
cgctcgccgcctcccgcgccaatggagacagagaagcttccgcccaatgccaagccgtat
gccggcgagaagccgccccctccggcgccggcggccgccctgcgcgacctgttccgcttc
gccgacggcctagatcgcgtcctaatggccgtcggcacgctcggcgctctcgtccacggt
tgctccctccccgtctttctccgcttcttcgccgacctcgtcgattccttcggctcccac
gccgacgaccccgacaccatggtccgcctcgtcgtcaagtacgccttctacttcctcgtc
gtcggcgccgccatctgggcgtcgtcctgggcggagatttcctgctggatgtggaccggc
gagcgccagtccacgcggatgcggatccggtacctccaggcggcgctcaagcaggacgtc
tccttcttcgacactgacgtgcgcacctccgacgtcatctatgccatcaacgccgacgca
gtcatcgtccaggacgccatcagcgagaagctcggcaacctcatccactacatggccacc
ttcgtcgccggcttcgtcgtcggcttcactgcggcgtggcagctcgcgctcgtcacgctc
gccgtcgtgccgctcatcgccgtcatcggcggcctcaccgccgccaccatgggcaagctc
tcctccaagagccaggacgcgctctccagcgccagcaacatcgcagagcaggccctgtcg
cagatacggatcgtgcagtcgttcgtcggcgaggagcgggtggcgcaggcctactcgtcg
gcgctagcggtggcgcagaggatcggctaccggaacggctttgctaagggccttgggctg
ggcggcacctactttactgtcttctgctgctacgctctgctcctctggtatggcggtcac
ctcgtccgcggccaccacacaaacggcgggctggccatcgccaccatgttctccgtcatg
atcggcggactcgctcttgggcagtcggcgcctagcatggcggcgtttgccaaggcgagg
gttgcggcggcgaagatcttccgcatcatcgaccacacgccaggcatcaccaaggaaggc
gacgccggcgtggagctggagtcggtgaccgggcggctgcagctgagaaacgtggagttc
gcgtacccgtcccggccggacacgccgattctgcgccgcttctctctaagcgtgccggcc
gggaagacggtcgcgctggttggcagctctggctcagggaagagcacggtggtgtccctg
atcgagaggttctacgacccgagttcagggcaaatcatgcttgacggcgttgagctcaag
gatctgaagctgcggtggctgcggtcgcagatcggcctggtgagccaggagccggcgctt
ttcgcgacaagcatcagggagaacctgctgctcgggagggaggaggcgagccaggtggag
atggaggaggccgcaagggtcgccaacgcccactccttcatcatcaagctccccgacggc
tacgacacgcaggtgggggagcgcggcctgcagctctccggcggccagaagcagcggatc
gccattgcccgtgcgatgctcaagaacccggccatcctcctcctggacgaggccaccagc
gccctggactccgagtccgagaagctcgtgcaggaggcgctggaccgcttcatgatcggc
cgcaccaccctcgtcatcgcacacaggctctccaccatacgcaaggccgacctcgtcgcc
gtcctgcaggctggcgccgtctccgagatgggcgcgcacgacgacctcatggccagagga
gacagcggcgcctacgccaagctcatccgcatgcaggagcaggcgcacgaggcggccctc
gtcagcgccaggaggagcagcgcaaggccctccagcgcccgcaactccgtcagctcaccc
atcatgatgcgcaactcctcctacggccgctcgccctactcccgccgcctctcggacttc
tccaccgctgacttcagcctgtccgtcatacatgacccggccgcccaccggatgggcatg
gggatggagaagctcgcgttccgtgcgcaggcgagctccttctggcggctggccaagatg
aactcgcccgagtggggctacgcggtcgccggctccctgggatccatggtgtgcggctcc
ttcagcgccatctttgcctacatcctaagcgcggtgctcagcatctactacacgccggac
ccgaggcacatggaccgggagatcgccaagtactgctacctcctcatcggcatgtcctcc
gcggcgctgctcttcaacaccgtgcagcacctcttctgggacacggtcggcgagaacctg
accaaacgcgtgcgcgagaagatgctcacggcggtgctccgcaacgagatggcctggttc
gacatggaggccaacgccagcgcgcacatagccgccaggctcgcgctggacgcccagaac
gtgcgctccgccatcggggaccgcatctccgtcatcgtgcagaactcggcgcttatgctc
gtcgcatgcaccgccgggttcgtcctgcagtggcgcctcgcgctcgtgctcctcgccgtc
ttcccgctcgtcgttggcgccaccgtgctgcagaagatgttcatgaagggcttctccggt
gacctggaaggcgcgcacgccaaggcgacgcagattgccggggaggcggtggccaacgtg
cgcaccgtggcggcgttcaactcggaggacaagatcacgaggctcttcgaggccaacctg
cacaggccgctccggcgctgcttctggaaggggcagatcgccggcatcggctacggtgtg
gcgcagttcctgctgtacgcgtcctacgcgctgggcctgtggtacgctgcatggctggtg
aagcacggcatctccgacttctccaagaccatccgcgtcttcatggtgctcatggtctcc
gccaacggtgccgccgagacgctgacgctggcgccggacttcatcaagggcgggcgggcc
atgcactcggtgttcgagaccatcgaccgcaagacggaaatcgagcccgacgacgtggac
accgcagccgtccccgagcggcccaggggcgacgtggagctgaagcacgtcgacttctcg
tacccgtcgcggccggacattcaggtcttccgggacctgagcctccgcgcccgcgccggc
aggacgctggcgctggtggggccgagcgggtgcggcaagagctccgtgctggcgctgatc
cagcgcttctacgaacccagctccgggcgcgtgctcctggacggcaaggacatccgcaag
tacaacctcaaggcactgcggcgggtggtggccatggtgccgcaggagccgtttcttttc
gccggcaccatccacgacaacatcgcgtacgggcgcgagggcgcgacggaggcggaggtg
gtggaggcggcaacgcaggcgaacgcgcacaagttcgtgtcggccctgccggaagggtac
aagacgtgcgtcggggagcgcggggtacagctgtctggagggcagcggcagcggatcgcc
atcgcgcgagcgctggtgaagcaggcggccatcatgctgctggacgaggcgacgagtgcg
ctggacgccgagtcggagcgctgcgtgcaggaagcgctggaccgggccgggtcagggcgg
acgaccatcatcgtggtagcgcaccggctggctacggtgcggaacgcgcacaccatcgcg
gtcatcgacgacggcaaggtggtggagcaagggtcgcactcgcacctgctcaaccatcac
cccgacggatgctacgcgcggatgctgcagctgcagcgcctcacgccccacaccgtggcc
atgcccgttcccggaccatctgcatccaacgtttga
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