Hordeum vulgare subsp. vulgare (domesticated barley): 123413596
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Entry
123413596 CDS
T11213
Name
(RefSeq) protein argonaute 1B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123413596
03036 Chromosome and associated proteins [BR:
hvg03036
]
123413596
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123413596
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123413596
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123413596
microRNA pathway
RISC loading complex
123413596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
123413596
NCBI-ProteinID:
XP_044962468
UniProt:
A0A8I6Y7Q2
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All DBs
Position
7H:complement(10041558..10049477)
Genome browser
AA seq
1216 aa
AA seq
DB search
MVRKKRTGTGESSGEASGAPGQGSSQPAERAPPQQHGGGGGRGWVPQQGGRGGGQHLGRG
GGQYQGRGGPPEYQQRDYQGRGQAGGGLPEYQQRDYQGRGQTGGGPPEYQQRGPQGRGNS
GGGPPEYQPRGPQGRGNPGGGPPEYQPRGPQGRGHQGGGPPEYQPHDPQGRGHPGGGPPE
YQPRGPQGRGHPSGGPPEYQPRGPQGRGHPGGGPSEYQPRDPQGRGGPPEYQQHDYQGRG
GPRPRGGGMPQPSYGGHRGGRGGHNVPPGQSRTVPELHQAPDVQYQAPVVSPSASGAGSS
SQPVAEVSSGQVEQQFQKLDISDQSSTSQAIQPAPASSKSVRFPLRPGMGKCGDRCVVKA
NHFFAELPDKDLHQYDVTITPEVTSRGVNRAVIAELVKLYRQSHMNGRLPAYDGRKSLYT
AGPLPFTTRTFEIALQDEDEGLVGGQATPRRERQFRVVIKYAARADLHHLAMFLAGRQPD
APQEALQVLDIVLRELPTARYSPVSRSFYSPNLGRRQRLGDGLESWRGFYQSIRPTQMGL
SLNIDMSSTAFIEPLPVIEFVAQLLCRDISVRPLTDSDRVKIKKALRGVKVEVTHRGNMR
RKYRISGLTSQATRELSFPVDDRGTVKTVVQYFLETYGFNIQHTTLPCLQVGNQQRPNYL
PMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQEREKDILQTVHHNAYYEDPYAQEFGI
KIDEQLASVEARVLPPPRLKYHDSGREKDVLPRVGQWNMMNKKMVNGGRVSHWACINFSR
NVQDNAAKVFCHELAIMCQISGMNFAPEPVLPVLSARPEHVERALKARYHDAMNASNPPG
KELDLLIVILPDNNGSLYGDLKRICETELGLVSQCCLTKHVFKMSKQYLANVALKINVKV
GGRNTVLVDALARRIRLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAG
LVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEG
QFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILP
GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYAR
CTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGARGGPPQGGPRSSTRFGNVAVR
PLPALKENVKRVMFYC
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggttaggaagaaaagaaccggcaccggagagagttccggagaggcttcgggagctcct
ggacagggttcctcgcagccagctgagagagcccctcctcaacagcatggcggtggtggt
ggacgtggttgggtgcctcaacaaggtggccgtggcggtgggcaacacctaggccgtggc
ggtggacagtatcagggccgtggtggcccacctgaatatcaacagcgtgactaccagggc
cgtggacaagcaggtggtggtctaccagaatatcaacagcgtgactatcagggccgtgga
caaacaggcggtggtccaccagaatatcaacagcgcggccctcagggccgtggaaattca
ggtggtggtccacctgaatatcaaccgcgcggccctcagggccgtggaaatccaggtggt
ggtccacctgaatatcaaccgcgcggtcctcagggccgtgggcatcaaggtgggggtcca
cctgaatatcaaccgcacgaccctcagggacgtggacatccaggtggtggtccacctgaa
tatcaaccgcgcggccctcagggccgtggacatccaagtgggggtccacctgaatatcaa
ccgcgcggccctcagggccgtggacatccaggtgggggtccatctgaatatcaaccgcgc
gaccctcagggtcgtggtggtccacctgaataccaacagcatgactatcagggacgtggt
ggcccacgccctagagggggtggaatgccgcagccatcctatggcgggcataggggagga
cgtggaggacacaatgttcctccaggtcagtcaagaacagttcccgagctgcaccaagca
ccagatgtccaatatcaagccccggtggtttcaccatccgcatcgggagctggctcatcc
tctcagcccgtggcagaggtgagcagtggacaagtcgagcaacagtttcagaaacttgac
atcagtgatcaaagttcgacgagccaagccattcaaccggcacctgcatcaagcaaatca
gttcgattcccattgcgccctggaatgggtaaatgtggggatcggtgtgtggtgaaagcc
aatcatttcttcgcggagctccctgataaagaccttcaccaatacgacgtgaccataacg
ccagaggttacatcgcgcggtgttaatcgtgctgtgattgcagaacttgtaaagctgtat
agacaatctcatatgaatggacgtctgcctgcctatgatggaaggaagagcctttataca
gctgggccattaccatttactacgaggacatttgaaatcgctctgcaagatgaagatgaa
ggcctcgttggtgggcaagccacaccaaggcgtgagagacaattcagagtggtcatcaag
tatgctgcccgtgctgatctccatcatttggctatgtttctagccgggaggcaaccagat
gcacctcaagaagctcttcaggtgcttgacattgtgctacgggaattgcctactgccagg
tattccccagttagtagatcattttattctcccaacctagggagacgtcagagacttggg
gacggattggaaagttggcgtggattttaccaaagtataagacctactcagatggggctt
tcgctgaatattgatatgtcttctacagcatttatcgagcctctccctgtgattgagttt
gttgctcagcttctgtgcagagacatctcagttagaccgctcactgattcagatcgtgtg
aagattaagaaagccctacgaggtgtaaaggttgaggttacacatagaggaaacatgcgt
aggaaataccgtatatctggcctcacatcacaagcaacgcgagagctatcattccctgtt
gatgatcgcggtactgtgaagactgtggtgcaatacttcctggagacgtatggtttcaat
attcagcacaccactttaccatgcttgcaagtcggtaatcagcaaaggccaaattatctc
cccatggaggtttgtaaaattgttgaaggacaacgctactcaaaacgactgaatgaaaaa
caaataactgctctactgaaagtgacttgccagcgccctcaagagcgtgagaaggacatc
ttgcagactgtgcatcacaatgcgtactacgaagatccatatgcacaggaatttggcata
aaaattgatgagcaacttgcatcggttgaagctcgtgttctgcctccgccaaggcttaag
taccatgatagtggcagagagaaggatgtcttacccagggtcggccagtggaacatgatg
aacaagaaaatggtcaatggtggtagagtcagccactgggcatgtattaacttctctcgg
aatgtgcaagataatgctgccaaggttttctgtcatgagttggctataatgtgccaaata
tctggaatgaactttgcacctgaacctgtgctgcccgtacttagtgcgaggcctgaacac
gtggaaagagctctgaaggcacgttatcatgatgccatgaacgcaagcaatcccccaggc
aaagaacttgacctgctaattgttatactgccggataataatggttctctttatggggat
cttaaaaggatttgtgagactgaactaggattggtatcccagtgttgtcttacaaaacat
gtgtttaagatgagcaagcagtatcttgcaaatgtagctcttaaaatcaatgttaaggtc
gggggaaggaatactgtactcgtggatgctttggcaaggaggattcgccttgttactgac
cgaccgaccataatatttggtgctgatgttacacatcctcaccctggagaagattccagc
ccttccattgcagctgtggttgcttctcaagactggcctgagataactaagtacgcagga
ttagtgagtgcccaagcccataggcaagagctgatacaggatctttttaaagtatggcaa
gatccccaaagaggaactgtgactggcggcatgatcaaggagcttctcatatctttcaag
agggcaactgggcagaaacctcagagaatcatattttacagggatggtgtcagcgaggga
cagttctaccaagttctgttgtttgaacttgatgccattaggaaggcctgtgcatccttg
gagccaaattatcagcctccagttacttttgtggttgtccagaagcgtcaccacactagg
ctttttgctaacaatcacaatgatcagcgtactgtcgatagaagcgggaacatactgcct
ggcaccgttgttgattcgaagatctgccatccgacagaattcgatttctacttgtgtagc
catgctggcattcagggaacaagccggcctgcccactatcatgttctctgggacgagaac
aaatttactgctgatgagttgcaaactctcacaaacaacctgtgctacacgtatgctcga
tgcacccgctctgtatcgattgttcctcctgcatactatgcccatctggcagccttccgg
gctcggttctacatggagccggacacctccgacagcgggtccgtggcgagcggtgcacgt
ggcggtcctccacagggcggtccacgcagcagcaccaggtttgggaacgttgctgtcagg
cctctccccgccctcaaggaaaacgtcaagcgcgtcatgttttactgctaa
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