Hordeum vulgare subsp. vulgare (domesticated barley): 123413606
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Entry
123413606 CDS
T11213
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123413606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123413606
03036 Chromosome and associated proteins [BR:
hvg03036
]
123413606
Spliceosome [BR:
hvg03041
]
Complex B
Other components
Prp19-related factors
123413606
Complex C
123413606
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
123413606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
HAT
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_2
TPR_17
HAT_Syf1_M
Mad3_BUB1_I
TPR_7
TPR_12
HTH_31
Motif
Other DBs
NCBI-GeneID:
123413606
NCBI-ProteinID:
XP_044962478
UniProt:
F2DFW9
LinkDB
All DBs
Position
7H:524064751..524070349
Genome browser
AA seq
719 aa
AA seq
DB search
MALTTRGGGGADQAQPPPAPDASLGFLTKRDTEVKLPRATRVKNKTPAGVQITAEQILRE
ARERQEPEIRPPKQKITDVHELADYRLRERKRFEDLIRRVRWSVSAWVKYAKWEEGQKDF
ARARSVYERALDVAHRDHTLWLKYAEFEMRNRYVNHARNVWDRAVSLLPRIDQLWYKYIH
MEELLGAVANARQVFERWMGWRPDIAGWNSYIKFELRYGEVERARAIYERFVAEHPRPDT
FIRYAKFEMKRGEVERARRVYERAADLLVDDEDAEVLFVAFAEFEEKCREVERARAIYKY
ALDRVPKGRAEDLYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYI
RLEESVGNKDRIRDVYERSIANVPPAEEKRYWQRYIYLWINYALYEELDAQDMERTREVY
RECLKLIPHKKFTFAKLWLMAAQFEIRQKNIKAARQILGNAIGMAPKGKIFKKYIEIELY
LGNFDRCRTLYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAIAQPALDTPEVL
WKEYLQFEIDEDEFDRARELYERLLDRTKHLKVWISFAEFEASAGLGEDDGSEENKNDAG
YQEQQTERVRRCRAVFERAFDYFRTNAAELKEERAMLLEEWLKKELSFGDLGDVTLVQKK
APRKVKRKRPLPTDDGSNIAFEEYIDYIFPDEVTLAPNLKILEAAYKWKKQKANDTQDD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccacccgcggcggcggcggcgccgaccaggcgcagcctccgccggctccc
gacgcgagcctcggcttcctcacgaagcgcgacacggaggtcaagctcccccgcgcgacg
cgggtgaagaacaagacgcccgcgggggtccagattaccgccgagcagatcctccgtgag
gcccgggagcggcaggagcctgagatccgcccgcccaagcagaaaattactgacgtccac
gagctcgccgactaccggctgcgcgagcgcaagaggttcgaggacctcattcgccgcgtc
cgctggagcgtctccgcgtgggtcaagtatgccaagtgggaggaggggcagaaggacttc
gccagggctcgctccgtctacgagcgcgccctggacgtcgcccaccgcgaccacaccctg
tggctcaagtatgccgagttcgagatgcgcaaccgctatgtcaaccatgccaggaacgtc
tgggaccgtgccgtctcgctcctgccccgcatcgaccagctgtggtacaagtatatccac
atggaggagctgcttggtgccgtcgccaatgctcgccaggtctttgagcgctggatggga
tggcgtcctgatattgctggctggaactcgtacatcaagtttgagctgcgatatggggag
gttgagcgtgctagggcaatctatgagcggtttgttgccgagcacccacggcccgacacc
ttcatccgatatgcaaagttcgagatgaaacgcggagaagtggagcgggcgcggcgtgtg
tatgagcgtgcagcggacttgcttgtggatgatgaagatgcagaggtgctgtttgtagca
tttgctgagtttgaggaaaagtgccgggaggtggagcgtgctcgtgccatatacaagtat
gcacttgacagagtgcctaagggcagggctgaggatctttacaggaagttcctagcattc
gagaaacagtttggtgaccgtgaggggattgaggatgccattgtgggaaagcggagattc
caatatgaagatgaggtgaggaagaacccactcaattatgactcatggtttgattacatc
aggctggaggagagcgtcgggaataaggacaggatcagggatgtgtatgagaggagtatc
gcaaatgttcctcctgcagaagagaagcggtactggcagaggtatatctacctttggata
aactatgctttgtatgaggaacttgatgcacaggacatggaaaggacccgggaggtctat
agggagtgtctgaaactcattccacacaagaaatttacctttgctaagctgtggctgatg
gccgcacagtttgagattagacagaagaacataaaggctgcaaggcagattctcggtaat
gcaataggtatggcacccaaggggaaaatatttaagaagtacattgagatcgagctttat
ctgggcaactttgaccgctgtagaactctgtatgaaaaatacatcgaatggtctccagca
aattgttatgcctggaggaagtatgcagaactggaaaagaaccttagtgagactgatcgt
gctcgatctatatatgagcttgctattgctcagccagcccttgatacgcctgaagttcta
tggaaggagtacttgcagtttgaaattgacgaagatgaatttgatagagcaagagaactg
tatgagagattgcttgatagaacaaagcatttgaaggtatggatcagctttgctgaattc
gaggcctcagctggcttgggagaagacgatggaagtgaggagaataagaatgatgctggt
tatcaggaacagcagacagagcgggtccggaggtgtcgggctgtctttgaaagggcattc
gactacttcaggaccaatgctgcagagctaaaagaagaaagagcaatgctcctggaagag
tggctcaaaaaagagttgagctttggtgatcttggtgatgtcacgttagtgcagaagaag
gcgccaaggaaagtgaagaggaagagaccactccccacggacgatggctccaatattgcg
ttcgaggagtacatcgattatatcttccctgatgaagtcacgctggcaccgaacctcaag
atattggaagctgcttacaagtggaagaagcagaaggcaaacgacacacaggatgactga
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