Hordeum vulgare subsp. vulgare (domesticated barley): 123413860
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Entry
123413860 CDS
T11213
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00906
Carotenoid biosynthesis
hvg01100
Metabolic pathways
hvg01110
Biosynthesis of secondary metabolites
Module
hvg_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
123413860
Enzymes [BR:
hvg01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
123413860
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
Thi4
FAD_binding_3
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
123413860
NCBI-ProteinID:
XP_044962560
UniProt:
A0A8I6WHA9
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Position
1H:46015067..46020313
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AA seq
592 aa
AA seq
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MPPLLSPPTARCLHHRSPRLPAPPVGHCPSRLRPLVGGEARGGGRGRLAVVSERQAAAVV
EKSLGEGEGGDGERYDAIVVGSGIGGLVAATQLAAKGARVLVLEKYIIPGGSSGYYRRDG
FTFDVGSSVMFGFSDKGNLNLITQALEAVGCKMEVIPDPSTVHFHLPGALSVLVHREYDD
FIEELVRKFPHEKEGILKFYGTCWKIFNSLNSLELKSLEEPLYLFGQFFKKPLECLTLAY
YLPQNAGDIARKFIKDQQLLSFIDAECFIVSTVNALKTPMINASMVLCDRHFGGINYPVG
GVGGIAVSLANGLVEKGSAIRYKANVTNVILENGKAVGVRLSNGKELFARTVISNATRWD
TFGKLVKAEELPEEEKNFQKNYVKAPSFLSIHLGVKASVLPAGTDCHHFVLEDDWSNLEK
PYGSIFLSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLSRKDYEQKKELVANEIIQRLE
NKLFPGLQDSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNTTSIDGLYCV
GDSCFPGQGVIAVAFSGVMCAHRVAADIDLEQRSPILDTGLLGVLRWLRTLA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccctcctctcgccccccacggcgcggtgcctccaccaccgctccccgcgcctc
ccggcgccccccgtcgggcactgcccttcccgcctccgacctctcgtcggcggagaggcc
cgcggaggcggcagggggagactggcggtggtgtcggagaggcaggcggcggcggtggtt
gagaagtccctgggagagggagaggggggcgacggggagcgatacgacgcgatagtggtc
gggtcggggatcgggggcctggtggcggccacgcagctggccgcgaagggggcccgcgtg
ctggtcctcgagaagtacatcatccccgggggcagctccgggtactaccgccgcgacggc
ttcaccttcgacgtcggctcctccgtcatgttcggcttctccgacaagggaaacttaaat
ttgataacgcaagcactagaagcagttggatgtaagatggaagtcataccagacccttcc
acggttcatttccatctacctggtgctctctccgttcttgtgcatagggagtatgatgac
ttcatcgaagagctggttagaaaattccctcatgaaaaagaaggaatcctaaaattctat
ggcacatgttggaagatcttcaattcattaaattctttggaactaaaatccttggaagaa
cctctatacctattcgggcaattttttaagaagcctttggagtgcttgactctcgcatac
tatttgccacagaatgctggggatattgctcgcaagttcataaaagatcagcagttgcta
tccttcatagatgctgagtgttttatagtgagcacagtcaatgccttgaaaacacccatg
atcaatgcgagcatggtattgtgcgataggcacttcggaggaattaattatccagttggt
ggtgttggtggtattgcggtgtctttggcaaatggccttgttgaaaagggcagtgccata
cgctacaaggcgaatgtgaccaatgttattcttgaaaatgggaaagctgttggagtgagg
ttgtcaaatgggaaggagttatttgctagaacagtaatatcaaatgccacgagatgggac
acatttggaaaactcgtgaaggctgaagagcttccagaagaggagaaaaactttcagaag
aattatgttaaagcgccatcttttctatccattcatctgggtgtcaaagcttcagtttta
cctgctggtactgattgccaccattttgtactggaggatgactggtcaaacttggaaaag
ccttatggaagcatatttttaagtatccctacagttcttgatccatccttggctcctgaa
gggcatcacattcttcatatatttacaactgcaggtatagaagattgggagggtctatct
aggaaggattatgagcagaaaaaggagcttgtggcaaatgagatcatacaaagacttgaa
aataagttgtttcctggtcttcaagactcaatagtcctcaaggaggtaggatctccaaaa
actcaccgcagatttcttgcccgaaatgacggtacatatggacccatgccacggggtaaa
cccaagggtttgttggcaatgcctttcaataccacttcaatagatggactttactgcgtg
ggagacagctgttttcctgggcaaggagtgattgctgtggcgttttcaggggttatgtgt
gctcatcgtgtcgcagcagacatagatcttgaacaaaggtctcctattctagacacgggc
cttctcggtgtcctcagatggttgagaacgctcgcatga
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