Hordeum vulgare subsp. vulgare (domesticated barley): 123415986
Help
Entry
123415986 CDS
T11213
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123415986
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123415986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_BSK1_C
TPR_8
TPR_12
TPR_11
TPR_16
TPR_10
Coatomer_E
TPR_19
TPR_9
ARM_TT21_2nd
ANAPC3
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
123415986
NCBI-ProteinID:
XP_044962708
UniProt:
F2DKQ0
LinkDB
All DBs
Position
1H:48235550..48241406
Genome browser
AA seq
381 aa
AA seq
DB search
MAARYNRTNYSSYLNEEPMPDATSEKEQGNEYFKQKKFAEAIECYSRSVAMSPTAVAFAN
RAMAYLKLRRFEEAESDCTEALNLDDRYVKAYSRRITARKGLGKIKEAMDDAEFAVSVDA
NNPELRKQYSEIKALLMEKMAKRSSVQAKHTISEFDKAGDRKNTTSHAPSDPQKDSFMEV
DSPGRAAAGIRELSAGVSKGGSGVILKDNNMQQSRDAKQKPGPEISVQELASRAASRYMS
STVKSVKTPKTAYDFEVSWRAISDDLTQQIQLLKSIPPERLPEIFKDALSSAFLIDIVKC
TASIFRDDVVLAVSILENLAKVSRFDLIIMCLSPMHKSELRKIWGQTFLAETASPDQVEI
LRQLQAKYVQGGWHDDMFTLS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcggtacaatcgcacaaactactcttcctacctgaatgaagaaccaatgcct
gacgccacgtcggaaaaggaacagggtaatgagtatttcaaacagaagaagtttgctgaa
gcaatcgagtgctactctagaagtgttgcaatgtcgccgacagctgttgcctttgccaac
cgagctatggcatatcttaaactaagaagatttgaagaggcagagagtgattgcactgag
gctctgaatctggatgaccgttatgttaaagcatactcacgcagaattactgcaagaaaa
ggacttgggaagattaaggaagcaatggatgatgctgaatttgctgtaagtgtcgatgct
aacaatccagaattgaggaaacaatattctgagataaaagctctgctcatggagaaaatg
gccaagagaagttcagttcaagctaagcatacaatttctgaatttgataaagctggtgat
agaaaaaataccacttctcatgcaccaagtgatccccagaaggacagtttcatggaagtt
gattcacctgggagagctgcggctgggatcagagaattatcagctggtgtgtccaaagga
ggatctggtgtaatcctcaaagacaacaatatgcagcaatctcgagatgctaaacaaaag
cctgggccagaaatatcagtgcaagagcttgcatcacgtgctgcttcacgctatatgtcc
agcactgtaaaaagtgtgaagacaccaaagacagcttatgattttgaggtttcttggaga
gctatctctgacgaccttacccagcaaatacagttgctaaagtcaattccaccagagaga
ctaccagagatttttaaggatgcactttcatcagcttttctgattgatatcgtgaagtgc
acagcctcaattttccgggatgatgtagtgttagcagttagcattttggagaatttggct
aaagtttctcgctttgacttgatcatcatgtgcctctcacccatgcataaatctgaactg
cggaagatatggggtcaaacattccttgccgagactgcatcgccagatcaagttgaaatc
ctcaggcagctgcaagccaagtacgttcaaggaggatggcatgatgacatgttcactttg
agctaa
DBGET
integrated database retrieval system
