Hordeum vulgare subsp. vulgare (domesticated barley): 123418541
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Entry
123418541 CDS
T11213
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123418541
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
123418541
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
123418541
NCBI-ProteinID:
XP_044962963
UniProt:
A0A8I6WU44
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Position
1H:494328582..494330296
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AA seq
386 aa
AA seq
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MSSTFAGVSVLAGGELCPSTQSSVFTSTNCGYHLLVVQDYSRTKRATPTGVSISSRPFMV
GRHEWCIDYYPNCHNKGCDDFISLYVNLLDDDGGVGDAEEPVKAKFDFSFIDEAEKHKPM
YISGTKTFGFRSECLRDYGKFMRKDALEQSANLMDDCFTIRRDIMICDTEDVGGNKVLLS
EVDQDLNNLLETKVGADVTFEVSGEMFSAHRCVLAARSEVFMAQFFGPMKEGSTKSTVVQ
IEDMEAKVFRALLSFIYTDSIPVLEEEVMEEDQPETVEGQEEEAAEDVQWLQDLVVAADR
YDLQRLKFICEKQLSQSQCTAVSSVASTLALAEQRHCRALKEACLKFIQVQSPLCLQKVM
ASVGWEPLITTYPSVLNELIAKLASN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacgttcgccggtgtatccgtcttggccggcggtgagctgtgcccttccacc
cagtcgtccgtcttcaccagcacgaactgcgggtaccacctgcttgtggtccaggactac
tcgcggacgaagcgagcgacacccaccggcgtgagcatcagctctcgccctttcatggta
ggacgccatgaatggtgcatcgactactatcctaactgtcacaacaagggttgtgatgat
ttcatttctctatatgttaaccttctcgatgacgatggcggtgtcggtgatgccgaagag
cctgtgaaggccaagtttgatttcagtttcatcgacgaggcggagaagcacaagccaatg
tacatttctggaaccaaaacatttggcttccgctccgagtgtctgcgagactacggcaag
ttcatgagaaaagatgcccttgaacaatcggcgaatctaatggatgactgtttcaccatc
cggcgtgacatcatgatctgtgacaccgaggatgtcggtggcaacaaggtgctcctgtct
gaagtagaccaagatttaaacaatctccttgagactaaggtgggtgctgatgtgacattc
gaggtcagcggagagatgttctctgcgcaccgatgtgtgcttgcagcccgatctgaagtc
ttcatggcacaattctttggccccatgaaggagggcagtactaaatccactgttgtacag
atcgaagacatggaagcaaaagtgttcagggctttgcttagcttcatctacacggactca
atccctgtattggaggaggaggtcatggaggaggaccaaccagaaactgtggaaggacaa
gaagaggaagcagcagaggatgtgcaatggctgcaagacttagttgtagccgcagacaga
tatgatctccaacggctcaagtttatctgtgaaaagcaattgtcccagtcccagtgcaca
gctgtgagctcggtggcgtccactcttgctcttgctgagcagcgccactgccgtgcattg
aaggaggcgtgcttgaagtttatccaagtccaatctcccttgtgtttgcaaaaagtaatg
gcgtctgttggctgggagcctttaattacgacctatccctctgttttgaacgagctcatc
gccaaacttgcttcaaactaa
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