Hordeum vulgare subsp. vulgare (domesticated barley): 123421338
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Entry
123421338 CDS
T11213
Name
(RefSeq) paired amphipathic helix protein Sin3-like 5
KO
K11644
paired amphipathic helix protein Sin3a
Organism
hvg
Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hvg03036
]
123421338
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
123421338
REST complex
123421338
Heterochromatin formation proteins
Other heterochromatin formation proteins
123421338
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3_corepress
Sin3a_C
PAH
RSF
Motif
Other DBs
NCBI-GeneID:
123421338
NCBI-ProteinID:
XP_044963464
UniProt:
A0A8I6WJH4
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All DBs
Position
1H:complement(511950712..511955472)
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AA seq
801 aa
AA seq
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MASSDEADDDNYGYKREKKEYMLETMQCLLFARDNLPQDVYHEFVKTMTEVWKNCADPDG
QIRNICPENCIETVLKLFQGWATVKQSFLNFTEGRSPVEGNGDVGADVVNPLLQKPMDFL
SRLKACPKMRDDDYAAFLQTMHDFCRDRTMTPLEVYKNVKRCMRNCPELLKEFVDNYLPA
DLKAVLRDKKVDNHSLDGIHMKEGYGEWPHAEEDEEDKVKPLPDWTASKAEKLPPEVDPK
KLERACTPSYYLLPYNLTLHSSYWTKLGRSILNDTLVCSVSGMESSKHKATNGYETNILY
CEEDMFESDMLLHRFRATADLIANLQTLPSSRLRINEHLTPLHRRCIEKLYDDDPDLDDL
LESQNTSAVLDILLSRLNQKVEDLSEARSYLHKVHCSQIIAKNYCRSLDHRGTSFKQLDA
KRMSQKALLAEANEMNKKKNVGDKYADTDMHNDISKIISSACVSEEKQVMNWAKIVYPFL
SAHCLWPSSKETVAPAKACEHCGTSKDFLSSIPDALPANKLPSFSKRGEFTRKNSNDFSS
SHDGFGPGIEEGEFIPDPEIIESDAMLGAGKEPVSCDVAASGSDGLNSRCRIIGTSEPST
CDHGNKYEKQHESRQHSKTSAKVRGVKGGTCCFLIVLRRLYQILYDRLQTAKGLCTDDQL
YAEFKEKSNKLVAHCIDNSNFEDFCLKFLGPKSFELFTLDIVINRVIKQLCIIYSRDQDN
SLFQFLENIRRPVVPKVVVRHQNFPNNPSNGLLKHDQGEQEKEALAATVKRPLHFERRKK
RKLENSATSSSQLGGVTETPS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttccgatgaagctgacgacgacaattacggatacaaaagggaaaaaaaggaa
tacatgctggagactatgcaatgcttgctatttgctagagacaacctcccccaagacgtg
taccatgagttcgtcaagacaatgaccgaggtttggaaaaactgtgctgaccctgatggt
caaataaggaacatctgccctgaaaactgcatagagacagtgttgaagctattccagggc
tgggctacagttaaacagagcttcctgaactttactgaaggccgtagccctgttgaaggc
aatggcgatgtcggagccgatgtcgtcaaccccttgctgcagaaaccaatggattttctt
tccagactgaaggcatgccctaaaatgagagacgatgattatgccgcttttttgcaaacc
atgcacgacttttgcagggacaggaccatgactcctctagaagtttacaaaaatgtgaag
agatgcatgcgtaactgtcctgagctgttgaaagagtttgtggataattatctccctgca
gacctaaaggccgttctaagggataaaaaagttgataatcacagcttggatggtatccat
atgaaagaaggttatggagaatggcctcacgccgaagaggatgaggaagacaaggttaaa
cccttgccagactggactgcctcaaaagctgagaaattgcccccagaagtggatcccaaa
aaactcgaacgagcttgcactcctagctattacctgctgccatataatttaactcttcat
tcaagttattggaccaaactgggaaggtctattctcaacgatactttggtttgttctgta
tctgggatggaaagctctaagcacaaagctacaaatggttatgagacaaacattttatac
tgtgaagaagacatgtttgagagtgacatgctattacaccggtttcgtgcgactgcagac
cttattgcaaatctccaaactcttcctagcagccgtttgaggataaatgagcatttaact
cctctacacaggaggtgcattgaaaaactatatgatgatgatcctgaccttgatgatctg
ttggagagtcagaatactagtgctgttctggatattctactttctcgtctaaatcagaag
gtagaagatttatcggaggcgcgctcatatttgcataaggtgcactgctcacaaattatt
gccaagaattactgcagatcgcttgatcatcgtggcacctctttcaaacaattggatgca
aagaggatgagccaaaaagcattgctggcggaagcaaatgaaatgaataaaaagaagaat
gttggagataaatatgctgatactgacatgcacaatgacataagcaaaataatctcttct
gcatgtgtgtctgaagagaagcaggtgatgaattgggcaaaaatagtatatccatttctt
tctgctcattgtctatggccttcgtctaaggaaactgtagctcctgcaaaagcttgtgaa
cattgtggtaccagcaaagattttctcagtagcatacccgatgctttgcctgctaataag
cttccttcattttccaagagaggtgaattcacaaggaaaaattccaacgactttagctcg
tcacatgatggttttggcccaggcattgaggagggtgagttcatacccgatccagaaatc
attgagtcggatgccatgctcggtgccggaaaagaaccagtaagttgtgatgttgctgct
tccggtagcgatgggttgaactctcgttgtcgcataatcggtacttctgaacctagtact
tgtgaccacgggaacaaatatgagaagcagcatgaatcaaggcaacactccaaaacgtca
gctaaagtgcgtggtgtgaaaggaggcacttgttgttttctcattgtgcttcgccggctt
taccagattttgtatgacaggctacaaactgcgaaaggtttatgcaccgatgatcaatta
tatgcagaattcaaggagaaaagcaacaagctagttgcccactgtattgacaattccaat
tttgaggacttctgcctgaaatttcttgggccaaagtcctttgaactttttactctggat
atagtgataaaccgagttatcaagcagttgtgcataatttattcaagagaccaagacaac
tcgctctttcaattccttgagaacataagaagaccagtcgtacccaaagttgttgtccgg
catcaaaactttcccaacaatccatcgaatggattgctgaagcatgatcaaggggagcaa
gagaaagaagctcttgctgccaccgtaaaacgtccgctccattttgagagaaggaaaaaa
cgcaagttggagaacagtgcaacgagttcctctcagcttggaggagtgactgaaactcct
agttga
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