Hordeum vulgare subsp. vulgare (domesticated barley): 123424596
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Entry
123424596 CDS
T11213
Name
(RefSeq) uncharacterized protein LOC123424596 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123424596
Membrane trafficking [BR:
hvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123424596
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
123424596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
Synaptobrevin
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
123424596
NCBI-ProteinID:
XP_044964172
UniProt:
A0A8I6X1N4
LinkDB
All DBs
Position
2H:complement(26540570..26550063)
Genome browser
AA seq
1112 aa
AA seq
DB search
MFAKRFLQKKLHQGGGGEKGGGGGGGAAAAGDAAQLDAQIALHYGVPYAASVMAFDPVQR
LLAVGTLDGRIKIFGGDNIEGILISPKSMPYKYLQFIQNQGILIAVSNENEIQVWNLEFR
QLFHSSQWDVNITAFSVIEGTFLMYLGDENGLLSVLKYDVDDGNLQKMPYNVSIHSLAEA
AGVPLLDTQPIVGILPQPNTLGTRVLIAYEKGFLVLWDVSEDHAIAVRGYGDLHMKGQVT
GAQTNASEDQIDNVDENEEEREICSLCWASRGGSTVAVGYITGDILLWDMTAVSSRQGKQ
TDVSSNVVKLQLASGSRRLPVIVLHWSAGSAKDINKGGKLFVYGGDDMGSEEVLTVLSLE
SSNGLESVRCASRVDLKLDGSFADMILIPDTGVPDKIRTSALFILTNPGQLNFYDGGALF
SARKSEEEYAQPESQKFPVVVPTIDPSITVTNMYSLTGRKHPSISLKKFCARQIVAPPIS
GNMKWPLTGGVPSEMSLKEDHAVERIYVAGYQDGSVRIWDATFPILMPMFVLDAKVSDVI
LDGANASVSSLAFCSLNMTFAVGTTSGLVRMYKLHENTGDSSFHFVSGSKQEVHAVHHGR
GFHCHVAFMGSNSPVRSLRFTSSGEALAVGYQNGQVAMFDASQLSVMFSVDCTSGTNSPM
VSLSIYSVGASSAKAGPSLKEIATSEKFPTAVILSLSKDARLTVVDSTSGLIVNSLLLDE
KQSSALLMYVLIDGASDEEQAPCQSQTGKEGHVLDQKQAQGAEINKKNASLHPQSGGSDS
LLLVCFEDVVLLFSLASLIQGSNKHLHKTKLTKKCCWSAIFKNKDDKACGLILFYQTGVI
ELRSLPSLDILAESSLMELLRWSYKTGMDKTMSSSNGQIALVNGSEFAIISLIDSENDFR
IPESLPCLHDKVLAAAAEAAMSISADQKGKQNPAAGVIGGIIKGLKGKADETANLRRSFN
SQTPSELLESIFLKGSYVESSLAYPDDPIEELSIDDIEIDDEVPLSPPPASSSASHTNYK
TTVEDERAKLFEGSSDADKPRMRSTQEILTKYKFGGDATAAAAHAKDKLMQRQEKLERIS
QRTAELQDGAENFASLAQELAKTMENKKWWKL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgaagcgcttcctgcagaagaagctgcaccagggagggggcggagaaaaagga
ggaggtggtggaggaggggcggcggcggccggcgatgcggcccagctggacgcgcagatc
gcgctccactacggggtcccctacgccgcctccgtcatggcgttcgaccccgtgcagcgg
ctcctcgccgtcgggacgctggatggcaggataaaaatctttgggggtgataatattgaa
ggcatcctcatatcgccaaagagcatgccatacaagtatcttcagtttatacaaaatcag
gggatactaattgcagtttctaatgagaatgaaatccaggtatggaatcttgaattcagg
cagctatttcattcttcccagtgggacgtcaatattactgctttttcagtcatagaaggg
acctttctgatgtaccttggtgatgagaatggcctgctttctgtattaaagtatgatgta
gatgatgggaatcttcaaaagatgccttacaatgtttccatacattccttagctgaagca
gctggtgttcccttgcttgatactcaacctattgttggaatattgcctcaacctaacacc
ttgggcaccagggtgctaattgcatatgagaaaggattcttagttctttgggatgtgtca
gaggaccatgcaattgctgttcgaggctacggggacttgcatatgaagggtcaagtcact
ggcgctcaaacaaatgctagtgaagatcaaatagataatgttgacgagaatgaggaagag
agagaaatttgctctctttgttgggcatcgagaggaggttcaactgttgctgttggctat
ataactggagacatacttctatgggatatgactgcagtatcctctagacaaggcaaacaa
actgatgtttcgtctaatgttgttaagctgcagctggcttctgggagtcgcaggcttcct
gttattgtcttgcactggtctgctgggtcagcaaaagacatcaataaaggcgggaaactt
tttgtatacggtggcgatgatatggggtctgaagaagttctgacggttcttagtctggaa
tcatctaatggcctagagtcagtaagatgcgcgtcgcgggtggacctcaaacttgatgga
tcctttgctgatatgattcttattccagatactggggttccagacaaaatacgaacttct
gcactttttatattgacaaatcctggacagttaaatttctatgatggtggtgctctattt
tctgcacggaaatcagaagaggaatatgctcagcctgagtcacagaaatttccagtcgta
gttcctacaattgatcccagcataacagttacgaatatgtattcactaactgggagaaag
catccaagtatttcattgaagaaattttgtgctaggcaaattgtcgcacctccgatatca
gggaatatgaaatggcctttgactggtggggttcctagtgaaatgtcactgaaggaagat
catgcagttgaaagaatatatgttgcaggctatcaagatggttctgtgagaatatgggat
gcaacttttcctattctgatgccaatgtttgtcttggatgcaaaggtgtctgatgttatt
ttggatggagcaaatgcctctgtatcatcgctggctttttgttcattaaacatgactttt
gctgttggcacaacaagtggtctggtccgcatgtataaacttcatgagaacactggggat
tccagctttcactttgtgagtggatctaagcaggaagttcatgctgttcatcatgggaga
gggttccattgccatgttgcctttatgggatcaaattcccctgtgcgatctctcagattt
acatcttcaggagaggcccttgcagtaggatatcaaaatggccaggtggctatgtttgat
gcaagtcaactgtcagtgatgttctctgtggattgtacatcaggaacaaattctcccatg
gtttcactcagcatttatagtgttggtgcctcttctgcaaaagcaggcccgtccctgaaa
gagattgctacaagtgaaaaatttccaacagctgttatactttccttaagtaaggatgca
cgtcttactgtagttgacagcacaagtggtctgatcgtaaattcacttctgctagatgag
aagcaatcttctgcacttttgatgtatgtcctcatagatggagcttcagatgaagagcaa
gccccatgtcaaagtcagacagggaaagaaggacatgttctcgaccaaaagcaagcacaa
ggagccgaaattaacaagaaaaatgcttctctacatccacagagtggcggttcagattca
cttcttttggtctgctttgaggatgtggtgcttttattttctctggcatcattgattcag
ggaagcaacaagcatctacataaaaccaagctcacaaaaaaatgctgctggtcagcaatt
ttcaagaacaaggatgataaagcttgtgggttgatattattttatcagacaggcgtcata
gaattgagatctttgccaagcttagatattcttgctgagagctccttgatggagttacta
agatggagttacaagacaggcatggataaaaccatgagctcctcaaatggacaaattgct
ctggttaatggatctgaatttgcaatcatctctcttatagactcggagaatgacttcagg
attccagaatcattgccgtgccttcatgataaagtacttgcagcagcagctgaagcagct
atgagcatctcggcagaccagaaaggaaagcagaatccggcagcaggagttattggtggc
attataaaaggattaaaaggcaaagcggatgaaactgcaaacctgagaagaagtttcaat
tcacaaacccccagtgaattattggagtcgattttcttgaaaggatcatatgttgaatca
tcactagcatatcctgatgatccaatagaagaactgtcaattgatgacatagaaattgac
gatgaagtgcccctatcccctccgccagcatcatcctctgcatctcacacgaattataaa
acaacagtagaggacgagagagcgaaactgtttgaaggatcaagtgatgctgacaaacca
agaatgagaagtacccaagaaattctcaccaaatataagtttggcggggacgcaacagct
gctgctgcccatgccaaggataagctcatgcagcggcaggagaaactcgagagaataagc
caacggaccgcggagcttcaggatggagcggaaaatttcgcttcactcgcccaggagctc
gcaaaaacaatggaaaacaagaagtggtggaaactataa
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