Hordeum vulgare subsp. vulgare (domesticated barley): 123424999
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Entry
123424999 CDS
T11213
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123424999
Enzymes [BR:
hvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123424999
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
90S particles
Helicases
123424999
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
123424999
NCBI-ProteinID:
XP_044964609
UniProt:
A0A8I7B2B2
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Position
2H:complement(62538456..62542048)
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AA seq
548 aa
AA seq
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MEEKPSLSSALFAGTRFDRKRFAGDIARFRTGARPAAPAPAAPDAAAPGPEKKRKRKSKS
KANAKKIKRKKKRADGAASAPDVVEGFSVFKGAEAKEAVEEPVEVVVREDEDEAVVRRRK
EAEREIERAAILRKRYDIHISGHNVPAPLESFEELVSRYDCDSYLVGNLSKLGFQEPTPI
QRQAISILLSGRECFACAPTGSGKTLAFLLPMLMKIKPGSKGCVKAVILCPTRELAAQTT
RECKKLAKGRKFGVKLMTKDLSQDGNFKDMHCDILVSTPLRLDHAIRKRDLDLSRVEYLV
LDESDKLFELGFVEVIDSIVKACSNPSIIRSLFSATLPETIEALARTIMHDAVRIIVGRK
NSASSMIKQKLIFAGTERGKLIALRQSFAESLNPPVLVFVQSKERAKELYRELVYDDIRV
DVIHGDLTEEQRQDAVDNLRAGKSWVLIATEVLARGMDFKGVNCVINYDFPESASAYIHR
IGRSGRAGRSGEAITFFTEEDKPFLRNIANVLVSSGCEVPSWMVALPKLRSRKHRVDRDR
ISFLTDED
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagccgagcctctcgtcggcgctgttcgccggcacccgcttcgaccgcaag
cgcttcgcgggggacatcgcgcggttccggacgggcgcgcggcccgctgcccccgccccc
gcggcccccgacgccgcggcgccgggcccggagaagaagcggaagcgcaagagcaagagc
aaggccaacgcgaagaagatcaagaggaagaagaagcgcgccgacggggccgcctccgcg
cccgatgttgtggaggggttcagcgtgttcaagggggcggaggcgaaggaggcggttgag
gagcctgtggaggtggtggttagggaggacgaggacgaggccgtcgtgaggcgtcggaag
gaggcagagagggaaatcgagagagctgccattctccggaagaggtacgacatccacatt
tcgggacataatgttccagcaccactggagagctttgaagaactggtttcaaggtatgac
tgtgattcatatttggttgggaacttgtcaaaacttgggtttcaagaacctacacctatc
cagaggcaggccatctctattcttctttcaggcagggagtgctttgcttgtgcacctaca
ggctctggcaagacacttgcattcctgctccctatgcttatgaaaatcaagccagggtct
aaaggatgtgttaaggctgttattctttgccccacaagggaattggcagcacagactacg
agagagtgcaaaaagttggcaaaagggaggaagtttggtgtcaaactaatgaccaaagat
ctctcacaagatggtaatttcaaggatatgcactgcgacatccttgtatccaccccactt
cgtttggaccatgctatacgaaagagagaccttgacttaagtagggtggagtaccttgtg
ttggatgaatctgataaactttttgagcttggattcgtcgaagtgattgattcaattgtc
aaagcatgctcgaacccttcaataattcgttctttgtttagtgccacattgccggaaaca
atagaggctcttgcacgtacaataatgcatgatgctgttcggatcattgtgggaagaaag
aattcagcttcctcaatgatcaagcaaaagttgatttttgctggaacagagagggggaag
ttgatagctcttcgccaaagctttgcagaatccctgaatcctccggtattggtctttgtc
caaagcaaagagagggcaaaagagctctacagagagctggtatatgatgacattagagtt
gatgtaattcatggtgaccttactgaagaacagcgtcaagatgctgttgacaacttgaga
gctggaaaaagctgggtgctaatagcaacagaggttcttgcgcggggaatggatttcaaa
ggtgtcaactgtgtaatcaactacgatttccctgagtccgcgtctgcctacattcacaga
ataggacggtctggaagagcaggcaggtcgggggaggcaatcacgttcttcacggaggag
gacaagccgttcctgcggaatattgccaacgtgctggtatcttcgggctgcgaggtccct
tcctggatggtggcattgcccaagctcaggagcaggaagcacagggtggacagggaccgc
atctcctttttaaccgacgaggattga
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