Hordeum vulgare subsp. vulgare (domesticated barley): 123425233
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Entry
123425233 CDS
T11213
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123425233
Spliceosome [BR:
hvg03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123425233
Other components
Complex C specific factors
123425233
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
123425233
NCBI-ProteinID:
XP_044964846
UniProt:
A0A8I6XDU3
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Position
2H:complement(89255790..89258816)
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AA seq
847 aa
AA seq
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MEEDAEGMDRLDMDGDFVGGRFDRDGEFYYKSRRQRAPQTRDDAVYGVFAEGDSDYDSEE
DEASRRRRRRKRRNDDSEPDLTRPVQFVSKGISAPKPEEEEEQQRSGLGQAASSSAAAAS
QEDAEDDQEPYMGLPTGFGQRIAEGARARREEKERQQESAKRRRGASGAGFESGKPAPPP
GSLESNTKVAKMMAMMGYKRGEGLGKNAQGITAPVETTLRPKNAGLGSVEGFKEPKAFTP
KENLPPPPPPPPAKKEKQRWSKKASAKKDQVLTKNELLARRAEQEQDEQPTLVQKVIDMR
GPQARVLTDLKGLSTEHEMEANDVPMPELQYNVRLLVDETEADIVRLDGQLRREQEKVAS
LVREKEKVAKQEALQKHQLQVMETIANVLEKVRVDDTAGLLTLGGLLKTFQELKLRYEEE
FKICSVAWVACRFAHPLLIRVFQGWQPLQNPLFGLEVMSSWKDLLQGDQPYDFSDATESM
APYAQLVSEVILPAVRISGTNSWKARDPEPMLRFLESWERLLPPIVLHSILEHVIMPKLT
AAVESWDPRSENVPIHVWVHPWLPTLGQRIDTLCHSIRYKLSSVLQLWQAHDSSAYAVLS
PWKGVFDPASWEDLIVRYIIPKLKMALQEFQINPASQKFDQFNWVMIWASAVPVHHMVHM
LEVDFFSKWQLVLYHWLSSPNPDFNEIMNWYKGWRGLFPPELLANERIRMLLTAGLEMMN
QAAEGHELAQPGARENVGFLRATEKRQFDAAQQASQYPSYHAVPGAAMSEMSFKESIQAY
AGDQGLLFMPRVNKFYKGMQVYEFGTVSICIDSVKRLLYAQLQEGAERWSSVSLTQLLEM
NRMARPH
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgccgagggcatggaccgcctcgacatggacggcgacttcgtgggcggc
cgcttcgaccgcgacggggagttctactacaagagccgccgccagcgggcgccccagacc
cgcgacgacgctgtctacggcgtcttcgccgagggggactccgactacgactccgaggag
gacgaggcgtcgcgccggcgccggcgccgcaagcgccgcaacgacgactccgagcccgac
ctcaccaggcccgtgcagttcgtctccaagggcatcagtgccccaaagccagaggaggag
gaggagcagcagaggtctgggcttggccaggccgcatcctcctcggccgccgccgcctcc
caggaggatgcagaggacgaccaggagccgtacatgggcctgcctacggggtttgggcag
cggatcgccgagggtgcgcgcgcgaggcgggaggagaaggagcggcagcaggagtctgcc
aagcgccggcgcggtgcatccggggcagggtttgaatctggaaaaccggcaccgccacct
gggagcctggagtccaacaccaaggtggctaagatgatggctatgatggggtacaagaga
ggagaaggcctcggcaagaatgctcagggaatcactgcaccagtggagaccaccttgcgc
cccaagaacgctggactcggcagcgtcgaggggtttaaggagcccaaagctttcactccc
aaggaaaacttgccacccccacctcctccaccgcctgccaagaaggaaaagcaacggtgg
tccaagaaggccagcgcgaagaaggatcaggtattgactaagaatgagctgttggcaagg
cgtgccgagcaggaacaggatgagcagcccacacttgtccaaaaggtgattgacatgcga
gggcctcaggctcgtgtgttgacagacttgaaggggttgagtactgaacatgagatggag
gcaaatgatgtgccaatgccggagttgcaatacaatgtgcggctgcttgttgatgagact
gaggctgatattgtcaggttggatgggcagctgcgacgggagcaggagaaggtggctagt
ttggtgcgtgagaaggagaaagtagcaaagcaggaggctttgcagaaacaccagctgcaa
gttatggagacaattgcaaatgtgctggagaaggtccgggttgatgacactgctggtttg
ctcactctgggggggttgcttaagaccttccaggaattgaagttgcgatatgaggaggag
ttcaaaatttgcagtgttgcctgggttgcttgccgatttgcgcatccactacttatccgg
gtatttcaggggtggcagccgctgcagaatccattgtttggcttggaggtcatgtcatcg
tggaaggatttgctgcagggtgaccagccatatgatttctcagatgctactgaatcaatg
gctccatatgcacagctggtcagtgaggtcatcctaccagctgtgcggatatcaggaact
aattcatggaaggctagggatccagaaccaatgctccgttttcttgagtcatgggaacgg
ttgctgccccctatcgtgctccattcaatattggagcatgtaataatgccaaagctcaca
gctgcagttgaatcttgggacccgcggagcgagaatgtaccaatccatgtatgggtacac
ccatggctgccaactctagggcaaaggatagatacactgtgccactctatccggtacaag
ctgagtagtgtcctccaattatggcaagctcacgattcatcagcttatgctgtgctatct
ccatggaagggtgtatttgatccagcaagttgggaagacttgatagtgcgttatatcatt
cctaaactgaaaatggcactccaggagttccagattaacccagcaagccaaaagtttgac
cagtttaactgggttatgatctgggcttctgctgtcccggtacaccatatggtccatatg
ttggaagttgatttctttagcaagtggcagctggttttgtaccattggctgagctcacca
aatcctgatttcaatgagataatgaattggtataagggctggaggggccttttcccacca
gagttacttgccaatgaacgcatacggatgcttctaacggctggtcttgagatgatgaac
caagctgctgaaggacatgagttggcacagccaggggctagggagaatgttggcttcttg
agagcaacagagaagcggcaatttgatgcagcacagcaagcatcgcaatacccatcttac
catgctgtgccaggagcagccatgtcagagatgagcttcaaggagtctattcaggcatat
gcgggtgaccaaggtttgttgtttatgcctagagttaacaaattctacaaaggtatgcaa
gtgtatgaatttggcaccgtgagtatttgcattgattccgtcaagcgactactctatgcc
caactccaagagggagctgaacggtggagttctgtgtctcttacacaattgctggaaatg
aacaggatggcaagaccacattag
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