Hordeum vulgare subsp. vulgare (domesticated barley): 123425436
Help
Entry
123425436 CDS
T11213
Name
(RefSeq) probable chromatin-remodeling complex ATPase chain
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123425436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123425436
03036 Chromosome and associated proteins [BR:
hvg03036
]
123425436
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
123425436
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
123425436
RSF complex
123425436
WICH complex
123425436
B-WICH complex
123425436
NORC complex
123425436
BRF complex
123425436
NuRF complex (fruit fly)
123425436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
Phage_holin_T
Motif
Other DBs
NCBI-GeneID:
123425436
NCBI-ProteinID:
XP_044965077
UniProt:
A0A8I6WQK5
LinkDB
All DBs
Position
1H:83456194..83466819
Genome browser
AA seq
1108 aa
AA seq
DB search
MGNPADYEDEEDEELSSSGDAEGEEQQQQQEEGSDEGEEEEDDEEEEQEPEGEQAAGDGG
EEEEEVDEEEIVAATTGAGADDYDDDGGDGAGGAEEAESTEDDAAAEEGGEEDADESEDA
TGKTEIGKRERAKLREMQKLKKQKIQEILDSQNASIDADMNKKGKGRLKYLLQQTEIFAH
FAKGSQSAEKKNRGKGRHASKVTEEEEDEEYLKEEDALAAGGTRLLVQPSCITGKMRDYQ
LAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNW
MKEIQRFCPVLRAVKFLGNPEERNHIRENLLAPGKFDVCVTSFEMAIKEKTALRRFSWRY
IIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAET
FDEWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYY
RALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMV
LLDKLLPKLKARDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDDRDASIEAFN
KPGSEKFIFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAQDRAHRIGQKKEVQVFR
FCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKDST
ITDEDIDRIIARGEEATAQLDAKMKKFTEDAIKFKMDDTAELYDFDDDKEEDKPDFKKLV
SDNWIEPPRRERKRNYSESEYFKQALRQGAPAKPREPRIPRMPNLHDFQFFNTQRLNELY
EKEVKYLVQTNQKKDTIGDGDGEDEEVEPLTEEEQEEKEQLLEEGFSTWTRRDFNTFIRA
CEKYGREDIKSIASEMEGKTEEEVQRYAEVFKERYTELNDYDRIIKNIEKGESKISRKDE
IMKAIAKKMDRYKNPWLELKIQYGQNKGKLYNEECDRFLLCMVHKLGYGNWEELKSAFRM
SPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQECDERDRQARKDKKNMTPTKRPSSSS
PAMDSPTQTPSKRGRRDGSAASGKRRRR
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggggaatccggcggactacgaggacgaggaggacgaggagctgtccagctccggcgac
gcggagggcgaggagcagcagcagcagcaggaggagggatcggatgaaggcgaggaggag
gaggatgatgaggaggaagagcaggagcccgaaggggagcaggcggcgggggatggcggg
gaggaggaggaagaggtggacgaggaggagatcgtcgccgccaccaccggcgccggcgcc
gatgactacgacgacgacgggggagacggcgctggcggggcggaggaggccgaatccacc
gaggacgacgccgccgcggaggagggcggcgaggaagatgccgacgagtctgaagacgcc
actggaaagacagagattggcaagcgggaacgagccaagctcagggaaatgcagaagctc
aagaagcagaagatacaggaaatactggatagccaaaacgcttccatcgatgccgacatg
aacaagaagggaaaggggcgactgaaatacctcttgcaacagactgaaatatttgctcat
tttgccaaaggaagccaatctgcggagaaaaagaaccgtggaaagggtcgtcatgcatca
aaggtgacagaggaggaggaagatgaagaatacctcaaggaggaagatgcccttgctgca
ggaggaacacgcttgcttgtacaaccatcatgcataactgggaaaatgagagattaccaa
ctagctggacttaactggctcattcgcttgtatgaaaatggcatcaatggaatattggct
gatgaaatgggtctcggaaaaactctccaaactatctccctgcttggatatctgcatgag
ttcagaggaataacaggtcctcacatggttgttgcaccaaagtctactcttggcaattgg
atgaaggaaatccaacgtttttgccctgttctgcgtgctgtcaagttcttaggaaaccca
gaagaaaggaatcatatacgggaaaatttgctagctccaggaaagtttgatgtctgtgtt
acaagttttgaaatggcaataaaagaaaagactgcattgaggcgttttagctggcgctat
attattattgatgaagctcatcggataaaaaatgagaactcccttctttctaagacaatg
aggcttttcagtacaaattaccgtctgctcatcacaggcactccgctgcagaataatctt
catgagctttggtctcttctcaacttcttgttgccagaaatatttagctctgcagagact
tttgatgaatggttccaaatctcaggggaaaatgatcaacatgaggttgttcagcagctt
cataaggttttgcgtccatttctcctaaggaggcttaaatcggatgtcgagaaaggttta
cctccaaagaaggagactatacttaaagttggaatgtctgagatgcaaaaacagtattat
cgtgctctccttcagaaggatctggaggttattaatgctggtggtgagcgcaagcgcctt
cttaacatagccatgcaactacggaagtgctgcaatcatccatatttattccaaggtgct
gagcctggcccaccttatacaactggggaccatctaattgagaatgcaggaaaaatggtt
ctgttagataaattacttcccaagctaaaggcccgtgactccagagtactgatattctcc
cagatgacccgtcttttggacatcctggaagattatctaatgtacagagggtatcagtat
tgccggattgatgggaatactggtggtgatgatcgtgatgcttccatcgaagctttcaac
aagccagggagtgaaaagtttatcttcttactttcaactagggcaggtggtcttgggatc
aatcttgctactgctgacattgtggttctttatgatagtgattggaaccctcaagtggat
ttgcaagctcaagaccgtgcacatagaattggtcaaaaaaaagaagttcaagtcttccgt
ttctgcaccgagtatactattgaggaaaaagtaattgagagagcatataagaagcttgcc
ttggatgctttggttattcagcaaggtcgattggcagaacagaaagctgtcaataaggat
gagctattgcaaatggtgagatttggtgctgaaatggtattcagctccaaggatagcaca
ataacagatgaagatattgaccgcattattgctagaggagaagaggcaacagcacaactt
gatgcaaaaatgaagaagttcacagaagatgctattaaattcaaaatggacgacactgct
gaactttatgattttgatgacgacaaggaggaagacaagccagattttaaaaagctagtc
agtgataactggatagaacctcctagacgagaaagaaaacggaactactctgaatctgaa
tattttaagcaagcacttcgccaaggtgccccagcaaaacctagggaaccgagaattccc
cgaatgccaaacttgcatgatttccagttcttcaacacacagaggctcaatgaactgtat
gaaaaggaagtcaaatacctcgtgcaaacgaatcagaaaaaggatacaattggtgatggt
gatggtgaggacgaagaagtggaacctctgaccgaggaggagcaagaagagaaggagcag
ctactggaagagggcttttcaacatggacaaggagggactttaacacattcattcgagct
tgtgagaaatatggtcgtgaagacataaagagtatagcatctgaaatggaggggaaaacg
gaagaggaagttcagcggtatgctgaagttttcaaggaaagatacacagaattgaatgat
tatgacagaattattaagaacattgagaaaggagaatcaaagatctctcgaaaggatgag
attatgaaagccatagcgaagaagatggaccgctataagaacccatggttggagttgaaa
attcagtatggccagaacaaggggaagctgtacaatgaagaatgtgaccgttttctgttg
tgcatggtgcacaaacttggctatggaaactgggaagaactaaagtcggccttccgcatg
tctcccttgttccgttttgactggtttgtgaagtccagaacgacacaagagctggctaga
aggtgcgacactctcatccgtctagtggagaaggagaaccaagagtgtgatgagcgagat
agacaggccaggaaagataagaagaacatgacaccaacaaagcgtccttcgtcaagtagt
ccagcaatggactctcctacgcagaccccctccaagaggggccggagggacggcagtgca
gcctcgggaaagagaaggaggcggtga
DBGET
integrated database retrieval system
