Hordeum vulgare subsp. vulgare (domesticated barley): 123425454
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Entry
123425454 CDS
T11213
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123425454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123425454
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123425454
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GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
LRR_4
F-box_5
F-box-like
LRR_8
F-box
Motif
Other DBs
NCBI-GeneID:
123425454
NCBI-ProteinID:
XP_044965096
UniProt:
F2EDD4
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Position
1H:complement(83811209..83816470)
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AA seq
593 aa
AA seq
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MGRGGARDGAGAGPAAAATPWHSLPDEVLEHAFSFLPAAADRGAAAAVCQGWLGAERRSR
RRLAVANCYAAAPRDAVDRFPSVRAAEVKGKPHFADFGLVPPAWGAEAAPWVAAAAEGWP
LLEELSFKRMVVTDECLEMIASSFRNFQVLRLVSCEGFSTAGLAAITEGCRNLRELDLQE
NYIEDCSNHWLSYFPESFTCLETLNFSSLEGEVNFAVLERLVSRCRNLKTLKLNNAIPLD
KVASLLRKAPQLVELGTGKFSAEYHSDLFAKLEAVFAGCKSLRRLSGAWDAVPDYLPAFY
GVCEGLTSLNLSYATVRGPELIKFIGRCKNLQQLWVMDLIGDHGLAVVACSCSKLQELRV
FPSEPFGAGQVLLTERGLVDVSASCPMLESVLYFCGQMTNEALITIAKNRPNFTCFRLCI
LEPRTPDYVTRQSLDAGFSAIVESCKGLRRLSVSGLLTDLVFKSIGANGNRLEMLSIAFA
GNSDLGLHYILSGCKSLKKLEIRDCPFGNKPLLANAAKLETMRSLWMSSCSLTLGACRQL
AEKMPRLTVEIMNDPGRTCPVESLPDDSPVETLYVYRTIAGPRSDTPDYVQIV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggcggcgcgcgcgacggcgccggcgccggccccgccgccgccgcgaccccg
tggcactcgctcccggacgaggtcctggagcacgccttctccttcctccccgccgccgcc
gaccgcggcgccgcggcggccgtctgccagggctggctcggggccgagcgccgctcccgg
cgccgcctcgccgtcgccaactgctacgccgccgccccgcgagacgccgtcgaccgcttt
ccctccgtccgcgccgccgaggtcaaggggaagccgcacttcgcggacttcgggctcgtc
ccgcccgcctggggcgccgaggccgcgccctgggtcgccgccgccgccgaaggctggccg
ctgctcgaggagctcagcttcaagcgcatggtcgtcaccgacgagtgcctcgagatgatc
gcctcctccttcaggaacttccaggtcctgcgactcgtctcctgcgaggggttcagcacc
gcagggctcgccgccattaccgaaggttgcagaaatttaagagaacttgacctgcaagag
aactacattgaggattgttccaatcattggctcagttactttccggaatcctttacttgt
ctggaaactctgaacttttcaagcttagaaggggaggtcaatttcgctgtacttgagcgg
ctagtgagcagatgtcgcaacctcaagactctgaagctcaacaatgctatccctcttgac
aaggttgctagccttcttcgtaaggctccacaactagtagaacttggaactggcaaattc
tctgctgagtatcattcagatctctttgcaaagctcgaagcggtatttgcaggttgtaaa
agcctgagaaggctctctggggcttgggatgctgttccagattacctgccagctttctac
ggtgtatgtgaaggcctcacatcacttaatctgagttatgctactgtacgaggccccgag
ctaataaaatttattggcagatgcaagaatctgcagcaattatgggtgatggacctaatt
ggcgaccatggtttagctgtcgtggcatgctcttgcagtaaactgcaagagctgcgggtc
ttcccgtctgaaccttttggtgccgggcaagttttattgactgaaagaggccttgttgat
gtttctgccagttgccccatgttggagtcagttctctacttctgcggccagatgactaat
gaggccctcattacaattgcgaagaatcgacccaacttcacttgtttccggttatgcatc
cttgagccccgtactccagattacgtcacacggcagtctcttgatgctggcttcagtgcc
attgtggaatcatgcaagggccttaggcgcctctctgtgtctggccttctgacagatctc
gtgttcaaatcaatcggtgcaaacggtaaccgtctagagatgctgtcaatcgcctttgct
gggaacagtgatcttggccttcattatatcctctctggctgcaagagcttgaagaagctg
gagataagggactgcccatttggaaataagccgttgctggcaaatgctgccaagctggag
acaatgcgatccctttggatgtcgtcgtgctcattgaccctgggcgcatgccgacagctt
gcagagaagatgcctcgccttaccgtggagataatgaacgatcctggacgaacatgccct
gtggagtcacttccggatgatagcccggtcgagacattgtatgtgtaccggacaattgcc
ggtccaaggtccgacacaccagattacgtccagattgtttaa
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