Hordeum vulgare subsp. vulgare (domesticated barley): 123425889
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Entry
123425889 CDS
T11213
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123425889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123425889
Spliceosome [BR:
hvg03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
123425889
Complex B
123425889
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Motif
Pfam:
RRM_1
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
123425889
NCBI-ProteinID:
XP_044965582
UniProt:
F2DE93
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Position
1H:91446234..91449528
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AA seq
249 aa
AA seq
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MSGEAAAGGGGEANGVQPNVTIYINNLNEKIKLDALKKSLNAVFSQFGKIIEVLAFKTLK
HKGQAWVVFEDVASATEALKRMQDFPFYDKPMKIQYAKTKSDVVAKADGTFVPREKRKRN
DEKPEKKQKREQHHDVNQAGVGMHAYPGAYGAPPLSQLPFGAGPKVMMPEIIVPNNILFV
QELPHDATALMLQMFFCQYPGFKEVRMIEAKPGIAFVEYGDEGQATAAMNLLQGFKIKEN
PMRITYAKK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaggcggcggccggcggcggcggggaggcgaacggcgtccagccaaacgtg
accatctacatcaataacctcaacgagaagatcaaactcgacgcacttaagaagtccctc
aatgcggttttctcccagtttgggaaaatcattgaggtgcttgcttttaagactttgaag
cataaagggcaagcatgggtcgtgttcgaagatgttgcatcagcaaccgaggctttgaag
aggatgcaagatttccccttctatgacaaacccatgaaaattcaatatgccaagaccaag
tcagatgttgtagcaaaagctgatggcaccttcgtacctcgagaaaaaaggaagaggaat
gatgagaaacctgaaaagaagcagaagcgtgagcagcaccacgatgttaaccaggctggc
gtgggcatgcatgcctatcctggtgcttatggggctccgccgctctctcagctacctttt
ggtgcgggaccgaaggtcatgatgccagagattattgtaccaaacaatattctcttcgtc
caagaactcccacacgacgcgaccgctttgatgctgcagatgttcttctgccagtaccca
gggttcaaggaagtgcggatgatcgaagcaaagcctggtattgcttttgtggagtatgga
gacgagggacaggcgaccgcagccatgaaccttcttcagggtttcaaaatcaaagagaac
ccaatgcgcatcacatatgcgaagaagtaa
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