Hordeum vulgare subsp. vulgare (domesticated barley): 123425962
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Entry
123425962 CDS
T11213
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123425962
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123425962
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123425962
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_UBOX
Prok-RING_4
DUF2921
zf_RING_Vps8
zf-RING_Vps41
zf_RING_Vps8_fungal
IBR_1
Motif
Other DBs
NCBI-GeneID:
123425962
NCBI-ProteinID:
XP_044965673
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Position
2H:235502736..235509183
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AA seq
566 aa
AA seq
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MRRSAGVLRAAVAGLFVLGLALPPLAASLRPLRERVASAGAAASSGSWADEHAFYKRDDN
DMSPYSWNITGIYKGSWSFAGATNGSSRFLEFVTSKGDSVLELLSTSTKISGVHYVQGTI
TFHDVIDKSHDRGVAQIRLEGVYIWPFRQLRLVANSGADGEPLQEEDYFLSNPYHLLRIF
SSQVFQDSSEEKNRRKNSLTHDMEKHCNIEIAAKVVRVSSNQNVEGDHEKYRLEGLMESP
AVDDDGECFSSILLNSTSLNVEAYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAA
KVSIIMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKA
SRPLNSGEGWEIMRRELSVLYSRFYGILLGGILLMYELHNFLRLLLFLMYSFWIPQIVMN
VIRDTRKPLHPQYILGMTAIRVAIPLYIFGCPSNFMRIEPDKKWCIAVTTFMGIQAAVLL
LQHYLGSRCFIPHQILPEKYCYHRKVEDNTNQPIDCVICMTTIDLSQRASEYMVAPCEHI
FHSGCLQRWMDIKMECPTCRRSLPPA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctctgccggtgtgctgagggccgctgtggcgggcctctttgtgctcggcctc
gccctccctccgctggccgcgtcgctgcggcctctcagggagcgcgtcgcgtccgccgga
gccgcggcctcctccggatcgtgggccgatgagcatgcattctacaagagggatgataat
gacatgagcccatattcatggaatattacaggaatatataaaggaagttggagctttgct
ggggccacaaatggctcttccaggtttcttgaatttgtgacatctaaaggtgactcggtt
ttagaattactgagtacgtcaacaaagataagcggggtacactatgttcagggaacaata
acattccatgatgttattgacaaatctcatgatcgtggggttgctcaaataaggttagaa
ggtgtgtatatatggccttttagacaacttcgtttggtggcaaacagcggcgcagatggt
gaaccacttcaagaagaggattacttcttgtcaaatccataccatctgctgcggattttc
tcctctcaagtgttccaagattcttctgaagagaagaaccgaaggaagaactctctcaca
catgacatggagaaacattgtaacatagaaatagccgctaaagtggtccgggtgtcatct
aaccaaaatgtagaaggagatcatgagaagtaccgattggagggcttgatggaaagtcca
gcagtggatgatgatggagagtgcttctcatctatcttactaaattcaacatcgctgaat
gttgaagcttattacaacaaagcagttaactatacactgatggtcacttttatctctttt
ctccaagttctgctgcttattagacaaatggaacacagcaacacccagtcaggagctgct
aaggtttctattattatgattgggcaacaagctatcatggatgcatatctttgtctactg
catttgactgctgggatattggttgagtctctctttaatgcctttgcaacagctgccttc
ttcaaattcgttgttttttctatttttgagatgaggtatcttcttgctatatggaaagca
agtagaccattgaacagcggagaaggttgggaaataatgaggcgggaactttctgttctc
tacagccgcttttacggcattcttttgggaggaatccttctgatgtatgagttgcacaat
ttcttgcgcctgcttcttttcctgatgtactccttttggattcctcaaattgtcatgaat
gtcatccgggatacaagaaaaccactgcaccctcaatatattttaggcatgactgctatc
cgtgtagccatcccgctatatatatttggttgtcctagcaacttcatgcgcattgagccc
gacaagaaatggtgcatagctgtgacaacgttcatgggtatccaagcagctgtgctgctc
ctccagcactatcttggttctcgctgctttattcctcaccagatcctccctgagaaatac
tgctaccacaggaaggtagaggataacacaaatcagcccattgattgtgtaatctgcatg
accacaattgatctttcccaaagagcaagtgaatacatggtggcaccgtgtgaacatata
ttccactcgggctgtttacaacgctggatggacatcaagatggagtgcccaacttgcagg
cgctctctaccaccagcttag
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