Hordeum vulgare subsp. vulgare (domesticated barley): 123426321
Help
Entry
123426321 CDS
T11213
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123426321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123426321
Membrane trafficking [BR:
hvg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
123426321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
123426321
NCBI-ProteinID:
XP_044966067
UniProt:
A0A8I6XDB8
LinkDB
All DBs
Position
2H:373799918..373810200
Genome browser
AA seq
567 aa
AA seq
DB search
MVLIPLIRDYIDRMLQDISGMKVLILDPQTVGMVSVVYSQSDLLRKEVFLVETVDDASSS
RASMAHLKAVYFLRPSSDNVQKLRRHLSAPRFAECHLFFSNILKIPQIQVLADSDEQEVV
QQIQEFYADFCAIDPFHFTLNIHNNHIYMLPTVVDPPGMQSFCDRAVDGIASVFLALKRR
PVIRYQRTSDVAKRIAQETTRLMYEQESGLFDFRRTENSSLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIENNKVDLKEFANVPKDQQEVVLSAVQDDFYRVNMFENFGDLGMNVKRMV
DDFQHLSKSSQNFQSIDDMAKFVTNYPEYRKTHGNVTKHVALVSEMSRMVEERKLMQVSQ
TEQELACASGQAAAFEAVTSLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLAS
RSAKYKSGLVQFLLKQAGVDKRTGDLYGNRDLLNIARNMARGLKGVENVYTQHQPLIFQT
MEGIVKGRLRDADYPLVGNHFQQGRPQDVVIFIVGGTTYEEARSVALYNAANPGVRFFLG
GSVVLNSKRFLENLGEAQRISKSSTLL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatccctctcatccgggattacatcgaccgcatgctccaggacatctccggc
atgaaggtcctcatcctcgacccccaaaccgtggggatggttagcgtagtgtacagccag
tcggatctcctgcggaaagaggtgtttctcgtggagacggtcgacgatgcctccagctcc
agggcgtccatggcgcacctaaaggccgtctacttcctccgcccgtcctctgacaacgtc
cagaagcttcgccgccacctctctgcgccgcgatttgccgagtgccacctcttcttctcc
aatatattgaagattccacagattcaagtgcttgccgattctgatgagcaggaggttgtg
cagcaaattcaggagttctatgctgacttttgtgccattgatcctttccattttactctg
aatatacacaataaccacatctacatgcttccaacggtggttgatcctcctggtatgcaa
agcttctgcgatcgagctgttgacggcatcgcttctgtcttcctggctctgaagcgtcgc
cctgttattagataccaaaggacatcagatgttgcaaaaaggattgcacaagaaactacg
aggttgatgtatgagcaggaaagtggcctgtttgattttagacgaactgaaaactcttcc
ttgttattggtgattgacagaagggatgatcctgttactccgttacttaatcagtggaca
tatcaggcaatggtccatgagcttattggaattgagaacaacaaagttgatctgaaggag
tttgctaatgtccctaaagaccagcaggaggttgttctatcagcggtacaagacgacttt
tatagagtgaacatgttcgagaattttggtgaccttggtatgaatgtcaaaagaatggta
gatgactttcaacatctttcaaaaagcagccagaattttcagagtatagatgacatggca
aaatttgtgaccaactatcctgaatatcgaaagacacatggaaatgtgacaaagcatgtt
gctttggtaagcgagatgagcagaatggtggaggaaaggaagcttatgcaagtttcgcag
acggaacaagagctagcatgcgcaagcggacaagcagcagcctttgaggctgttacttcc
ttacttaacaatgaaagtgtatctgatattgaccgtttgcgacttgtaatgctctatgct
ttgcggtatgaaaaagagagtccagttcagctgatgcagcttttcaacaaattggcttct
cgctctgctaaatacaagtcagggcttgttcaattcctgcttaagcaggctggtgttgat
aaaagaacaggcgacttgtatgggaaccgtgacctattaaatattgctcgcaacatggct
cgtggacttaagggtgttgagaatgtatacacccaacaccagcctctgatcttccaaaca
atggaaggaattgtcaaggggcgattacgggatgctgactatccacttgttggcaaccat
ttccagcagggcaggcctcaagatgttgtgatattcatcgttggtgggacaacgtatgag
gaagcaagatcagtggccctttataatgcagcaaatcctggagttcgtttcttccttgga
ggttcagtggttctaaattcaaagagatttcttgaaaacctgggggaggcccaaagaata
tcgaagtctagcactctattatga
DBGET
integrated database retrieval system
