Hordeum vulgare subsp. vulgare (domesticated barley): 123426380
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Entry
123426380 CDS
T11213
Name
(RefSeq) la-related protein 6C-like
KO
K15191
La-related protein 7
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123426380
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
123426380
SSDB
Ortholog
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GFIT
Motif
Pfam:
La
RRM_1
PAM2
HENMT1_C
RBD_AKAP-17A
K_channel_TID
RRM_MUD2_C
U_exon
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
123426380
NCBI-ProteinID:
XP_044966136
UniProt:
A0A8I6WSH8
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Position
2H:386882359..386885329
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AA seq
444 aa
AA seq
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MAAAQESSPDPDASATAAPPTPMSAPASFKFNVHAPEFVPMSPTATPMSAPAGGYYSPFL
QMQPAPDWSFLHDHEPVFFMPDFAHAKFAAAAAASNSAQAKGGGGGSADVAQKIVKQVEY
QFSDINLVANEFLLKIMNKDSEGYVPLSVISSWKKIKSLGATNQMLVKALRTSTKLIVSD
DGKKVRRRQPFTEKHKEELQSRMIIAENLPEDSSRNSLEKVFSVVGSVKNIKICHPQEPS
SARASKSDTLVSNKMHALVEYETSQQAEKAVEKLNDERNWRKGLRVRTVLRRSPKSVMRL
KRPDFDHYAGSDDESPHSQVSSDSPTSEAIHSPEAHPEDHQSGAKKGWARGRGKLHVVAP
HSPQSAPAGAVGHFDPSSPRQASQKCPLSPRQVSQKCPFSPRQPPQGPRMPDGTRGFTMG
RGKPAASSVAARTVAAPPPAPVLV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgcaggagagcagccctgaccccgacgccagcgccaccgcggcgccgccc
acgcccatgtcggcgccggcgtccttcaagttcaacgtgcacgcgccggagttcgtgccc
atgtcgcccaccgccacgcccatgtccgccccggcgggcggctactactcgcccttcctg
cagatgcagccggcgcccgactggagcttcctccatgaccacgagcccgtcttcttcatg
cccgacttcgcccacgctaagttcgccgccgccgccgccgccagcaatagcgcccaggcc
aagggcggcggcggaggctccgccgacgtcgcgcagaagatcgtcaagcaggtcgagtac
cagttcagcgacattaacctggtcgccaacgagttcttgctcaagatcatgaacaaagac
tccgaaggttacgttcccttgtcagtcatttcatcatggaagaagatcaagtctctggga
gcaaccaaccagatgctggtcaaggctctccgcacctccacaaagcttattgtcagcgat
gatgggaagaaagttcggcgcaggcagcccttcaccgagaagcacaaagaagaacttcag
tcccggatgatcatagcggagaatttgccagaggactcatcgagaaacagcctcgagaag
gtcttcagtgttgttggaagtgtgaagaacatcaagatatgccacccccaagagcctagc
tcagccagggcttccaagtcagacacactagtgagtaacaagatgcatgctctagtcgaa
tatgagacctcacagcaagctgagaaagcagtagagaagctaaacgatgagcggaactgg
aggaaaggcctccgtgtgcgcacagtactcaggcgctctcccaagtcagtaatgaggctc
aagcggcctgatttcgaccactatgctggctccgatgacgaatcgccacactcacaggtg
tcatccgactccccaacttcagaagctatccattcacctgaagctcatccagaggatcac
cagagtggggccaagaaagggtgggcaagagggcgagggaagctccatgtcgtggcaccg
cacagcccgcagtctgctcctgcaggcgcagtcggccactttgacccatcgagtcctcgc
caggcgtcccagaaatgcccattgagccccaggcaggtttcccagaagtgcccattcagc
cccaggcagcctccccagggcccgaggatgcccgacgggacacgcgggttcacaatgggc
agggggaagccagcggcatcatccgtggcagcccggacggttgctgctcctcctccggct
cctgttcttgtctag
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