Hordeum vulgare subsp. vulgare (domesticated barley): 123426398
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Entry
123426398 CDS
T11213
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00750
Vitamin B6 metabolism
hvg01100
Metabolic pathways
hvg01240
Biosynthesis of cofactors
Module
hvg_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
123426398
Enzymes [BR:
hvg01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
123426398
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NanE
NMO
Motif
Other DBs
NCBI-GeneID:
123426398
NCBI-ProteinID:
XP_044966166
UniProt:
F2DDV2
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All DBs
Position
2H:393960815..393962203
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AA seq
316 aa
AA seq
DB search
MASDGSGVVTVYGSGNNGAGTQLEPKSSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEA
GACAVMALERVPADIRAQGGVARMSDPGLIREIKRAVTIPVMAKARIGHFVEAQILESIG
VDYVDESEVLTLADDAHHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNV
VEAVRHVRSVMGDVRALRSMDDDEVFSYAKSIAAPYDLVMQTKQLGRLPVVQFAAGGVAT
PADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPNVLAEVSCDLGEAMVG
INLSDPKVERFAARSE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgacggcagcggcgttgtcaccgtgtacggcagcggcaacaacggcgccggt
acgcagctggagcccaagtcatcccctttctctgttaaggtgggcctggcccagatgctc
cgcggcggcgtcatcatggacgtcgtcaacgccgagcaggcgcgcatcgccgaggaggcc
ggcgcctgcgccgtcatggcgctcgagcgcgtccccgctgacatccgcgcccagggcggc
gtcgcccgcatgtcggacccgggcctcatccgcgaaattaagcgcgccgtcaccatcccg
gtcatggccaaggcccgcatcgggcacttcgtcgaggcccagatcctcgagtccatcggc
gtcgactacgtggacgagagcgaggtcctcacactcgccgacgacgcccaccacatcaac
aagcacaacttccgcgtccccttcgtctgcggctgccgcaacctgggcgaggccctccgc
cgcatccgcgagggcgccgccatgatccgcaccaagggcgaggccggcaccggcaatgtc
gtcgaggccgtccgccacgtccgctccgtcatgggcgacgtccgtgccctccgcagcatg
gacgacgacgaggtattctcctatgccaagagcattgccgcaccctacgacctcgtcatg
cagaccaagcagctcggccgcctgcccgtcgtccagttcgccgcaggcggggtggccacg
ccggccgatgcggccctcatgatgcagctcggctgcgacggtgtcttcgtcggctccggt
atcttcaagagcggggaccccgcgcgccgcgcacgcgccatcgtgcaggccgtcacccac
tacagcgaccctaatgtgctcgccgaggtcagctgcgacctgggcgaggccatggtgggc
atcaacctctccgatcccaaggtcgagcgctttgcggcgcgctccgagtga
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