Hordeum vulgare subsp. vulgare (domesticated barley): 123426531
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Entry
123426531 CDS
T11213
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123426531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123426531
Spliceosome [BR:
hvg03041
]
Complex A
Other components
Complex A specific factors
123426531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
zf-CCHC
KH_12
eIF3g
PHD_4
RRM_5
KH_PNO1_2nd
DUF6319
RRM_Nup35
RRM_7
Motif
Other DBs
NCBI-GeneID:
123426531
NCBI-ProteinID:
XP_044966305
UniProt:
A0A8I6WLD0
LinkDB
All DBs
Position
2H:430848431..430851849
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AA seq
752 aa
AA seq
DB search
MASAETLARSPSREPSSDPPRDAPRDASSEPHHNGSANAAGDGDSSSRRRRRSRWEQSND
ESGANSGGEGGAGGRKRKSRWAEEEPRPTIALPDFMKDFAAEMDPEVHNLNSRLLEISRL
LQSGLPLDDRPEGARSPSPEPIYDNLGIRINTREYRARERLNRERQEIISQLIRRNPAFK
PPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEG
KLLQKRDLKPDPSENEDLHVLVEADTEEALEAAAGMVEKLLTPVDEVLNEHKRQQLRELA
ALNGTIRDDEFCRTCGEPGHRQYACPNRTTTFKSEVQCKICGDGGHPTIDCPVKGTSGKK
MDDEYQNFLAELGGSAPESMNKSGGPMLAITGSGGGGGGGGGGSGSNSPWAAGNGAATAG
ANGLKKDYDETNLYIGYLPPMFDDSGLINLFSQFGEIVMAKVIKDRNTGQSKGYGFVKYS
DVSQANAAIAAMSGYHLEGRTIAVRVAGKPPQPAAPPGPPAGSAPPMYHSGDPSAGGYNS
QPYIGGHPPPPPPPGSYAPVPWGQPPPYASYPPPPPGMYNPAPGQTAPHSYGMQYPPPPA
PVPPPGTTSNDGAQNYPPGVTPPSSGAPTQPVPAPAYGNSGAQNMPHMYPPPPYSYAPYY
PSVTPVQPPPPPPPPPASVDPSQSIANAPWATHNAPPPPPPPASVDSSQSNAAAPWAAHN
APPPPPLPSSNDQPAAPYGADAEYDKFMSEMK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgccgaaaccctagcccgttccccatctcgcgagccctcgtccgaccccccc
cgcgatgccccccgcgacgcctcctccgagccccaccacaacggctcagccaacgccgct
ggcgacggcgactcgtcttcccgccgccgccgccgcagccgatgggagcagtccaacgac
gagtccggtgccaattcaggcggtgagggcggcgcgggaggacggaagcggaagtcgcgc
tgggccgaggaggagccccgcccgaccatcgcacttccggatttcatgaaggacttcgcc
gccgagatggatcccgaggtgcacaacctcaactcgcgcctcctagagatttcgcgcctg
ctgcagtcggggctacccctcgacgaccgccctgagggcgcccgctcgccgtcccctgag
ccgatatatgataacctgggcatccgcatcaacacccgcgaataccgagcgagggagcgc
cttaaccgcgagcggcaggagatcatctcccagctgatccgccggaatcccgccttcaag
cccccggcggattaccgcccacccaagctccataagaagctctacatccccatgaaggag
taccctgggtacaactttattggactcattattgggccccgtggcaacacacagaagcgg
atggagaaggagacaggggccaagatcgtaatccgagggaagggcagcgtcaaggaaggg
aagttgttgcagaagagggacttgaagccagatcccagtgagaacgaggaccttcatgtg
cttgtcgaggctgatactgaagaagcgttggaggctgctgcaggcatggtggagaagctg
cttacccctgtggacgaagtgctaaatgagcacaaacgccagcagctgcgtgagcttgca
gctctgaatggaacaatcagggatgatgagttctgtaggacttgcggggagccgggtcac
cggcagtatgcatgcccgaacaggacaacgacttttaagagcgaggtgcagtgtaagatc
tgtggtgacggtgggcacccgacaattgattgtccagtgaagggtacatctgggaagaaa
atggatgacgaataccagaacttccttgctgagcttggtggcagtgcacctgagtcgatg
aacaagtctggtggtccgatgctggctataacaggtagtggtggtggtggtggtggcggt
ggtggtgggagtggtagtaactcaccctgggctgcgggtaatggtgcagcaacagcagga
gccaacgggctcaagaaagactatgacgagaccaatctttatattgggtacttgccacct
atgtttgatgattcaggtctgatcaacctattttcacaatttggggagattgtcatggca
aaggttataaaggatcgcaacacagggcagagcaaagggtatggatttgtaaaatattca
gatgtctcacaggctaatgcagctattgctgcgatgagtggttaccatcttgaagggaga
actattgcagtcagagttgcaggcaagccaccacagccagctgcgccccctggtcctcca
gcagggtcagcaccaccaatgtaccactctggagatccttctgctggtggctacaactcg
cagccctacataggagggcatccaccaccaccacctcctccaggtagctatgctccagtt
ccttgggggcaaccaccaccttatgcttcgtaccctccaccgccaccaggcatgtacaat
cctgcacctggccagactgctccacattcatatggtatgcagtacccaccaccaccagct
ccagtccctccaccaggcactacgtcaaatgatggtgcgcagaactatcctccgggtgta
acaccaccaagttctggtgcacctacccagcctgtccctgctccagcatatgggaactct
ggtgcgcaaaacatgccacatatgtaccctccaccaccttatagttatgccccatattat
ccatctgtcacaccagtccagccgccgcctcctccaccaccaccaccagctagtgttgat
ccttcacaaagcattgcaaatgcaccttgggccactcacaacgcaccacctccaccccca
ccgccagctagtgtcgattcctcacagagcaatgcagctgcaccttgggctgcccacaat
gcaccgccgccaccacctttgccatcctccaatgaccagcccgctgctccctatggtgct
gatgcagagtatgataaatttatgtcggagatgaagtga
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