Hordeum vulgare subsp. vulgare (domesticated barley): 123426550
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Entry
123426550 CDS
T11213
Name
(RefSeq) autophagy-related protein 18d-like
KO
K22991
WD repeat-containing protein 45
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123426550
Membrane trafficking [BR:
hvg04131
]
Autophagy
Other autophagy associated proteins
Others
123426550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
BCAS3_WD40
Beta-prop_IFT140_2nd
Beta-prop_IFT80_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
123426550
NCBI-ProteinID:
XP_044966346
UniProt:
F2DH26
LinkDB
All DBs
Position
1H:111457551..111461655
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AA seq
385 aa
AA seq
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MTSQVSPSQGAGGSDVEDEDVELLSVNWNQDHSCFSAATTNDLRMFSCKPFKEELRRVYK
DGGFQIVEMLFRTSIFGLVDQGSDKQHQQNKLTIWDDLRNLLIGDFSFKSNIRAVKLSKD
YFVVALEHKIHVYSFKTLKLIHLIDTTSNPKGLCCLSHHADTSVMACPGTHQGIVRVEHF
GLKETKFITAHDSNISCMTLTVDGLLLATASVRGTLIRIFNTMDGACLQEVRRGVDKAEI
YSIALSPNLQWLAVSSDKGTMHIFSLRVRPRGKDASNGQSAIAGRQMDRSYSSSSVGSNA
SSSLSFMKGILPKYFSSEWSFAQFRLPEVTRYITAFGDQTTVMMIGLDGSFYRCSFDPVN
GGKMVLDEFIRFMKPSMSRSRSPSA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgcaggtatccccatcacagggcgcaggcggcagcgacgtcgaggacgaggat
gttgagctgctgtcggttaattggaaccaggaccatagttgcttcagtgctgccacaacc
aatgacctcaggatgtttagttgcaaaccattcaaagaggaattaaggagggtttacaag
gacggcgggtttcaaattgtcgagatgctgttccgtaccagcatatttggccttgtggat
cagggatccgacaagcagcatcagcaaaacaaactcaccatctgggatgatctccgtaac
cttctcattggtgacttctcattcaagtccaacatccgagccgtcaaattgtccaaggac
tactttgtggttgctctcgagcacaagatacatgtttacagttttaagactctgaagctc
atccatctgatcgataccacgtccaacccgaaaggattgtgctgcctctcgcatcatgca
gacacttcagtgatggcctgccctgggacgcaccaaggaattgttcgggttgagcatttt
gggttgaaggagaccaagttcatcactgctcatgactccaacatttcatgcatgacactc
accgtggatgggctcctcttggcaacagccagtgttaggggtactttgatcagaatattc
aacacgatggacggcgcttgtctgcaggaggtgcgcagaggagtagacaaagctgagata
tatagcattgcactatcaccaaacctgcagtggttggcagtgtctagtgacaaaggcaca
atgcatattttcagcttgagagtgagacctagagggaaagatgcaagtaacgggcaatct
gcaattgctggtcgacaaatggatcgtagttactcatccagttctgttggatccaatgcg
agctcatccttgtctttcatgaaagggattctccccaaatatttcagttcagagtggtca
tttgctcagttccgtttacccgaagtcacacgctatattacagcatttggagatcaaacc
actgtgatgatgattggtctggatggcagtttctacaggtgcagctttgaccctgtaaat
ggcgggaagatggtgctggatgaattcatccggtttatgaaacccagcatgtcccgttcc
aggagtccaagcgcctga
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