Hordeum vulgare subsp. vulgare (domesticated barley): 123426568
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Entry
123426568 CDS
T11213
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K27740
protein auxin signaling F-box 2/3
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123426568
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_6
LRR_14
HcyBio
Motif
Other DBs
NCBI-GeneID:
123426568
NCBI-ProteinID:
XP_044966359
UniProt:
M0X0M1
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Position
2H:complement(440541832..440546010)
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AA seq
574 aa
AA seq
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MTYFPEEVVEHIFSFLPAQCDRNTVSLVCKVWYEIERLSRRTVFVGNCYAVRPERVVLRF
PNVRALTVKGKPHFADFNLVPPDWGGYAGPWIEAAARGCVGLEELRMKRMVVSDESLELL
AKSFPRFRALVLISCEGFSTDGLAAIASHCKLLRELDLQENEVDDRGPRWLSCFPDSCTS
LVSLNFACIKGEVNAGSLERLVARSPSLRSLRLNRSVSVDTLSKILMRAPNLEDLGTGNL
TDDFQAESYLRLTLALEKCKLLRSLSGFWDASPFCLPFIYHVCGQLTGLNLSYAPTLDSS
DLTKMISHCAKLQRLWVLDCIGDKGLQVVASSCKDLQELRVFPSDFYIAGYSPVTEEGLV
AISLGCPKLSSLLYFCHQMTNAALHTIAKNCPNFTRFRLCILEPGKPDAMTNQPLDEGFG
AIVRECKGLRRLSISGLLTDKVFMYIGKFAKQLEMLSIAFAGDSDAGMMHVMEGCNNLRK
LEIRDSPFGDAALLENVTKYETMRSLWMSSCNVTEKGCQILASKMPMLNVEVINEVDESN
EMDENHGIPKVDKLYVYRTTAGARDDAPNFVKIL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgacctattttcccgaggaggtggtggagcacatattcagcttcttgcccgcacaatgt
gaccggaacacggtttcacttgtttgcaaggtatggtatgagattgaaaggctgagccgg
cgaactgtctttgtgggtaactgctacgccgtgcgccccgagcgtgtggtgcttcggttc
cctaatgtgcgggcactgacagtgaaggggaaaccacatttcgctgatttcaaccttgtg
ccgcctgattggggtgggtatgccggaccatggatcgaggcagcagccaggggctgcgtg
ggtcttgaggagctgcggatgaagcggatggtggtgtcagatgagagcctggagctgctt
gccaagtcattcccacgattcagggccctagttcttatcagctgcgaggggttcagcact
gatggactagcagctattgcaagtcactgcaagctcctgagggagttagatttgcaggaa
aatgaggtggatgatcgagggccaaggtggctctcctgcttccctgattcctgcacgtcc
cttgtctccttgaatttcgcctgcatcaaaggggaggtcaatgctggttcattagagaga
cttgttgctagatccccaagtcttcggagtttgaggttgaatcgctctgtgtcagtagat
acactctcgaagatattaatgcgcgcccctaatttagaggatctagggactgggaacttg
acagatgacttccaagctgagtcgtatctcaggctgacccttgcattggagaaatgcaaa
ctgctgaggagtttgtcgggcttttgggatgcttcccctttctgccttccattcatctat
catgtatgtgggcaactaacaggtttaaacttgagctatgctccgacactcgattcttct
gatctcaccaaaatgatcagccactgtgcgaaactccaacgtctttgggtactggattgc
atcggggataagggcttgcaagtggtggcctccagttgcaaggatctacaagaactcagg
gtattcccgtcagacttctatatcgccgggtattccccagtaacagaggagggacttgtt
gcaatatccttgggctgtccaaaactgagctcattgctatatttttgtcaccaaatgacc
aacgccgcactgcatactatagctaagaactgccctaatttcacgcgattcagactctgt
attcttgagcctgggaagcctgatgccatgacaaaccaaccattagatgaaggttttggt
gccattgttcgtgaatgcaaagggctaagacgattgtcaatatcaggtcttctcaccgac
aaggttttcatgtatattggtaaatttgcaaaacaacttgagatgctttcaattgcattt
gctggagatagtgatgcgggaatgatgcatgttatggaaggatgcaataatctgaggaag
ctggagattagagatagcccatttggtgatgctgcactcttggagaatgttaccaagtat
gagacaatgcgatccctttggatgtcatcgtgcaacgtcacagaaaaggggtgccaaatt
cttgcatcaaagatgccaatgcttaatgtggaggttataaatgaggtagatgagagcaat
gaaatggatgagaaccatggaatccccaaagttgacaagttatatgtttaccgcaccact
gctggggcaagggatgatgcaccaaattttgttaaaatcctatag
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