Hordeum vulgare subsp. vulgare (domesticated barley): 123426601
Help
Entry
123426601 CDS
T11213
Name
(RefSeq) probable alpha-amylase 2
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00500
Starch and sucrose metabolism
hvg01100
Metabolic pathways
hvg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
123426601
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
123426601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
123426601
NCBI-ProteinID:
XP_044966399
LinkDB
All DBs
Position
2H:complement(450141346..450145933)
Genome browser
AA seq
415 aa
AA seq
DB search
MGQMVSDGVVQEQAARNVGIIKNGREILLQAFNWESHKHNWWSNLEGRVADIAKSGFTSA
WLPPPTQSLSPEGYLPQNLYSLDSCYGSLQQLNSLIQNMNDHNIRAMADVVINHRVGTTK
GLNGMYNRYDGIPISWDEHAVTSCSGGKGNKSTGDNFDGVPNIDHTQPFVRKDIIEWLIW
LRETIGFQDFRFDFTKGYASKFVKEYIEESKPLFAVGEYWDSCEYAPPDNHLSYNQDKHR
QRIINWIDSTGGLCAAFDFTTKGILQEAVKGELWRLRDPEEKPPGVMGWWPSRSVTFIEN
HDTGSTQGHWPFPPDHVMEGYAYILTHPGIPTVFYDHFFDWGDSFHDEIAKLMEIRKSQD
IHSRSAVKILEASSNLYSAIIDDKLCMKIGEGSWCPSGPEWKLAACGDRYAVWHK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggccagatggtttccgatggtgttgtccaagaacaggcagctcgcaatgtcgggatc
attaagaatggaagggaaatcctattgcaggcttttaactgggaatcccataaacacaat
tggtggagtaatttagagggcagagttgccgacattgctaaatctgggtttacatcagca
tggttgcctccaccgacacaatcgttatctccagaaggctatctgccacagaacctgtac
agccttgactcttgttatggttctcttcagcagctaaattcgttgattcagaacatgaat
gaccacaatataagggctatggctgatgttgttattaaccatcgagttgggactactaaa
ggattaaatgggatgtataatcgttatgatggtatcccaatatcatgggacgaacatgct
gttacatcttgttctggtgggaaggggaataaaagtaccggcgataactttgatggggtt
cccaacatagatcatacccagccatttgtaaggaaggatattattgaatggctgatctgg
cttcgggaaaccattggatttcaagatttccgctttgatttcacaaaaggttatgcttca
aagtttgtgaaagaatacattgaggaatcaaagcctctttttgcagtgggggaatactgg
gacagctgtgaatatgccccccctgacaaccatctgagctacaatcaggataaacatagg
cagagaattatcaattggatagatagcactggaggactttgcgctgcgtttgatttcaca
acaaagggcattcttcaggaagctgtgaaaggagagttgtggcgtttgcgcgaccctgaa
gaaaagccacctggtgtgatggggtggtggccttcaagatcagtcacatttattgaaaat
catgacacagggtcaactcagggccattggccatttccacctgaccatgtcatggaggga
tatgcttatatacttacgcaccccggaatccccacagtgttctacgatcatttctttgac
tggggagattctttccatgatgaaatagcaaaactgatggagattaggaaatcccaggac
atacacagtcgttcagctgtcaaaattttggaagcaagctcaaatctgtactcggcaata
atcgatgataagttgtgcatgaagattggagagggctcctggtgcccaagcgggccagag
tggaagctggcggcatgtggagacagatatgccgtgtggcacaagtag
DBGET
integrated database retrieval system
